RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 CMTM3Q96MX0 182 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 FRMD6Q96NE9 622 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 TSSK2Q96PF2 358 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 MESP1Q9BRJ9 268 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 DDA1Q9BW61 102 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 TTTY10Q9BZA0 68 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 SMOC1Q9H4F8 434 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 ZCCHC4Q9H5U6 513 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 AKIRIN1Q9H9L7 192 aaPredicted RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 POLE4Q9NR33 117 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 PADI1Q9ULC6 663 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 VDAC3Q9Y277 283 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 HS3ST3B1Q9Y662 390 aa10.14□□□□□ -0.79
LIG3-204ENST00000585740 FASNP49327 2511 aaKnown RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 ANKRD11Q6UB99 2663 aaPredicted RBP10.14□□□□□ -0.79
LIG3-204ENST00000585740 KIF26BQ2KJY2 2108 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 IGLV1-36A0A0B4J1U3 117 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 SLC22A23A1A5C7 686 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 SMIM30A4D0T7 59 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 C2orf72A6NCS6 295 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 TVP23AA6NH52 213 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 MS4A18H0YCH9 400 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 H7C1C5 153 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 DCTN6O00399 190 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 SLC16A7O60669 478 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 KHDRBS3O75525 346 aaKnown RBP10.13□□□□□ -0.79
LIG3-204ENST00000585740 NCR1O76036 304 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 STK17BO94768 372 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 AKR7A3O95154 331 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 ABHD16AO95870 558 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 PLGP00747 810 aaPredicted RBP10.13□□□□□ -0.79
LIG3-204ENST00000585740 PSMB10P40306 273 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 LCN6P62502 163 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 TLE3Q04726 772 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 RASGEF1BQ0VAM2 473 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 ASAH1Q13510 395 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 MS4A18Q3C1V0 323 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 FDX2Q6P4F2 183 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 KCTD18Q6PI47 426 aaPredicted RBP10.13□□□□□ -0.79
LIG3-204ENST00000585740 BAIAP2L2Q6UXY1 529 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 ARMC10Q8N2F6 343 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 OTOSQ8NHW6 89 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 ITPKCQ96DU7 683 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 LIN37Q96GY3 246 aaPredicted RBP10.13□□□□□ -0.79
LIG3-204ENST00000585740 OR8B4Q96RC9 309 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 MRI1Q9BV20 369 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 FAM117AQ9C073 453 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 COMMD4Q9H0A8 199 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 SLITRK2Q9H156 845 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 C14orf119Q9NWQ9 140 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 PISDQ9UG56 409 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 MRM2Q9UI43 246 aaKnown RBP10.13□□□□□ -0.79
LIG3-204ENST00000585740 IKZF2Q9UKS7 526 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 HDGFL3Q9Y3E1 203 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 SPEGQ15772 3267 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 CEP295Q9C0D2 2601 aa10.13□□□□□ -0.79
LIG3-204ENST00000585740 ZFYVE26Q68DK2 2539 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 A0A0G2JK05 382 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 TMEM212A6NML5 194 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 C4orf47A7E2U8 309 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 UPK3AO75631 287 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 HPP00738 406 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 HLA-DQA2P01906 255 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 HLA-DQB1P01920 261 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 RAF1P04049 648 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 OR8G3PP0DMU2 310 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 IMPDH2P12268 514 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 NPR2P20594 1047 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 AZGP1P25311 298 aaKnown RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 RBMS1P29558 406 aaKnown RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 MLF1P58340 268 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 RPS11P62280 158 aaKnown RBP eCLIP10.12□□□□□ -0.79
LIG3-204ENST00000585740 HSF1Q00613 529 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 INSM1Q01101 510 aaPredicted RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 GLO1Q04760 184 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 DBPQ10586 325 aaPredicted RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 CHAF1BQ13112 559 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 EIF3IQ13347 325 aaKnown RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 IL18Q14116 193 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 SSPNQ14714 243 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 ZNF239Q16600 458 aaKnown RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 HACD4Q5VWC8 232 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 LIPNQ5VXI9 398 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 TRIQKQ629K1 86 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 BICRALQ6AI39 1079 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 TCEAL6Q6IPX3 200 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 LYPD4Q6UWN0 246 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 CCBE1Q6UXH8 406 aaPredicted RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 SLC35D2Q76EJ3 337 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 GDPD3Q7L5L3 318 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 RAB11FIP2Q7L804 512 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 RPS19BP1Q86WX3 136 aaKnown RBP10.12□□□□□ -0.79
LIG3-204ENST00000585740 PLCZ1Q86YW0 608 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 C19orf18Q8NEA5 215 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 OR11G2Q8NGC1 345 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 OR5AK2Q8NH90 309 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 POC1BQ8TC44 478 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 THEM6Q8WUY1 208 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 NSMAFQ92636 917 aa10.12□□□□□ -0.79
LIG3-204ENST00000585740 HTRA1Q92743 480 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms