RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 MYBPC1Q00872 1141 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 LGALS3BPQ08380 585 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 PGGHGQ32M88 737 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 MESTQ5EB52 335 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 DNM1P34Q6PK57 102 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 KLHL24Q6TFL4 600 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 SSX8Q7RTT4 187 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 C17orf78Q8N4C9 275 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 ZNF433Q8N7K0 673 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 OR8D4Q8NGM9 314 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 HDAC2Q92769 488 aaKnown RBP12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 PLEKHA8Q96JA3 519 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 SNX18Q96RF0 628 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 VCXQ9H320 206 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 NPDC1Q9NQX5 325 aaPredicted RBP12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 USE1Q9NZ43 259 aa12.85□□□□□ -0.35
SCAMP4-209ENST00000585335 TUBAL3A6NHL2 446 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 ZNF99A8MXY4 864 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 DHHO43323 396 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 RAD51DO75771 328 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 TP53P04637 393 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 ALPLP05186 524 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 ITGA5P08648 1049 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 IGFBP1P08833 259 aaPredicted RBP12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 HIST1H1CP16403 213 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 ZNF3P17036 446 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 PAICSP22234 425 aaKnown RBP12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 RUNX1T1Q06455 604 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 GINS1Q14691 196 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 HIST3H3Q16695 136 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 CEACAM16Q2WEN9 425 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 SLC35F1Q5T1Q4 408 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 C1QTNF12Q5T7M4 302 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 C9orf135Q5VTT2 229 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 LEG1Q6P5S2 330 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 ANKRD16Q6P6B7 361 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 P2RY8Q86VZ1 359 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 MCHR2Q969V1 340 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 MUCL1Q96DR8 90 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 SLC38A2Q96QD8 506 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 ACTR6Q9GZN1 396 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 RIBC2Q9H4K1 309 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 RNPEPL1Q9HAU8 725 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 SLC25A19Q9HC21 320 aa12.84□□□□□ -0.35
SCAMP4-209ENST00000585335 RELNP78509 3460 aa12.83□□□□□ -0.35
SCAMP4-209ENST00000585335 CACNA1CQ13936 2221 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC22A23A1A5C7 686 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 H7C1C5 153 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 MITFO75030 526 aaPredicted RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 FARS2O95363 451 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 CLDN1O95832 211 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 GRNP28799 593 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 CRABP1P29762 137 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 KIR2DL3P43628 341 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 GIPRP48546 466 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 LCN6P62502 163 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 ARF1P84077 181 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 SLC34A1Q06495 639 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 PHYHD1Q5SRE7 291 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 C10orf128Q5T292 105 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 ANKRD34AQ69YU3 496 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 MEX3BQ6ZN04 569 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 WDFY1Q8IWB7 410 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 PACRGLQ8N7B6 248 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 OR52E2Q8NGJ4 325 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 OR1K1Q8NGR3 316 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 OR4Q3Q8NH05 313 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 OR4K13Q8NH42 304 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 HSD17B8Q92506 261 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 VSX1Q9NZR4 365 aaPredicted RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 TMEFF2Q9UIK5 374 aaPredicted RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 RRP15Q9Y3B9 282 aaKnown RBP12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 DOPEY1Q5JWR5 2465 aa12.83□□□□□ -0.36
SCAMP4-209ENST00000585335 SH3D21A4FU49 640 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 OR5H1A6NKK0 313 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 CASKO14936 926 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 MGRN1O60291 552 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 KHDRBS3O75525 346 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 HOXB1P14653 301 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 COX6B1P14854 86 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 PAX7P23759 505 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 ZNF133P52736 654 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 UBE2NP61088 152 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 CDK5Q00535 292 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 NPRL3Q12980 569 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 TSC22D1Q15714 1073 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 GABRA6Q16445 453 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 TIMM23BQ5SRD1 257 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 LRFN4Q6PJG9 635 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 ZNF813Q6ZN06 617 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 LINGO2Q7L985 606 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 DMRTC2Q8IXT2 367 aaPredicted RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 CCDC36Q8IYA8 594 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 IQCF1Q8N6M8 205 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 SDR9C7Q8NEX9 313 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 NANOS1Q8WY41 292 aaKnown RBP12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 NSMAFQ92636 917 aa12.82□□□□□ -0.36
SCAMP4-209ENST00000585335 S100PBPQ96BU1 408 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms