RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 LINC01590Q5TEZ4 76 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 RPTNQ6XPR3 784 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 MEPCEQ7L2J0 689 aaKnown RBP14.3□□□□□ -0.12
SS18-226ENST00000585241 AAED1Q7RTV5 226 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 DOLPP1Q86YN1 238 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 OR6V1Q8N148 313 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 OR9Q1Q8NGQ5 310 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 ZFP3Q96NJ6 502 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 LINC00470Q9BZP3 86 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 NUAK2Q9H093 628 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 ZNF696Q9H7X3 374 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 PARPBPQ9NWS1 579 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 ASB6Q9NWX5 421 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 GLTPQ9NZD2 209 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 WARS2Q9UGM6 360 aaKnown RBP14.3□□□□□ -0.12
SS18-226ENST00000585241 PSORS1C1Q9UIG5 152 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 MYRFQ9Y2G1 1151 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 NOSIPQ9Y314 301 aaKnown RBP14.3□□□□□ -0.12
SS18-226ENST00000585241 COL6A6A6NMZ7 2263 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 POLEQ07864 2286 aa14.3□□□□□ -0.12
SS18-226ENST00000585241 OR6C65A6NJZ3 312 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 DCTN6O00399 190 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 XPNPEP2O43895 674 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 SLC43A1O75387 559 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 GLCEO94923 617 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 TNFAIP8O95379 198 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 CRHP06850 196 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 CTLA4P16410 223 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 TIMP3P35625 211 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 CSNK1A1P48729 337 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 CENPAP49450 140 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 NUDT6P53370 316 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 CLRN1P58418 232 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 GABARAPL2P60520 117 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 SLC35A2P78381 396 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 LGALS3BPQ08380 585 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 APOFQ13790 326 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 GGTLC2Q14390 218 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 STK11Q15831 433 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 C10orf128Q5T292 105 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 RIPPLY2Q5TAB7 128 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 DNM1P34Q6PK57 102 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 SLC25A47Q6Q0C1 308 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 SYT14Q8NB59 555 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 BPIFB6Q8NFQ5 453 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 TSSK2Q96PF2 358 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 RBP7Q96R05 134 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 SIGLEC11Q96RL6 698 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 TEAD3Q99594 435 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 DUSP21Q9H596 190 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 CNOT2Q9NZN8 540 aaKnown RBP14.29□□□□□ -0.12
SS18-226ENST00000585241 H2AFY2Q9P0M6 372 aaPredicted RBP14.29□□□□□ -0.12
SS18-226ENST00000585241 BLOC1S6Q9UL45 172 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 CLEC4AQ9UMR7 237 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 B9D1Q9UPM9 204 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 RPL36Q9Y3U8 105 aaKnown RBP14.29□□□□□ -0.12
SS18-226ENST00000585241 ARHGAP21Q5T5U3 1957 aa14.29□□□□□ -0.12
SS18-226ENST00000585241 IGKV1D-43A0A0B4J1Z2 117 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 FAM20BO75063 409 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 MRPL33O75394 65 aaKnown RBP14.28□□□□□ -0.12
SS18-226ENST00000585241 CEACAM8P31997 349 aaPredicted RBP14.28□□□□□ -0.12
SS18-226ENST00000585241 MTNR1AP48039 350 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 FMODQ06828 376 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 LCN1P1Q5VSP4 162 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 LRFN4Q6PJG9 635 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 B3GNT6Q6ZMB0 384 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 FOXL2NBQ6ZUU3 175 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 FAM214BQ7L5A3 538 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 ZNRF4Q8WWF5 429 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 IPCEF1Q8WWN9 437 aaPredicted RBP14.28□□□□□ -0.12
SS18-226ENST00000585241 MCHR2Q969V1 340 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 ZNF775Q96BV0 537 aaPredicted RBP14.28□□□□□ -0.12
SS18-226ENST00000585241 OR51V1Q9H2C8 321 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 SLCO5A1Q9H2Y9 848 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 MARCH7Q9H992 704 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 SCN3BQ9NY72 215 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 TPRKBQ9Y3C4 175 aa14.28□□□□□ -0.12
SS18-226ENST00000585241 EFCAB10A6NFE3 127 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 SLC16A7O60669 478 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 KHDRBS3O75525 346 aaKnown RBP14.27□□□□□ -0.13
SS18-226ENST00000585241 TOXO94900 526 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 GYPBP06028 91 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 LYNP07948 512 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 GSTT1P30711 240 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 PYCR1P32322 319 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 BLVRAP53004 296 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 RAB40BQ12829 278 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 KLHL12Q53G59 568 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 PHYHD1Q5SRE7 291 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 CARD17Q5XLA6 110 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 NUFIP2Q7Z417 695 aaKnown RBP14.27□□□□□ -0.13
SS18-226ENST00000585241 OR6K3Q8NGY3 331 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 OR6N1Q8NGY5 312 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 GGHQ92820 318 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 OTULINQ96BN8 352 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 TTYH2Q9BSA4 534 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 RHNO1Q9BSD3 238 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 SRA1Q9HD15 236 aaKnown RBP14.27□□□□□ -0.13
SS18-226ENST00000585241 AMBNQ9NP70 447 aa14.27□□□□□ -0.13
SS18-226ENST00000585241 PAK1IP1Q9NWT1 392 aaPredicted RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms