RNA–Protein interactions for RNA: ENST00000585031.2

TOP3A-220, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 4

Gene TOP3A, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-220ENST00000585031 M0R3G1 203 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 RNASE1P07998 156 aaKnown RBP15.36■□□□□ 0.05
TOP3A-220ENST00000585031 ZNF43P17038 809 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 OMGP23515 440 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 GATA3P23771 443 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 CRYBB2P43320 205 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 POLR2JP52435 117 aaKnown RBP15.36■□□□□ 0.05
TOP3A-220ENST00000585031 BLOC1S3Q6QNY0 202 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 VRK2Q86Y07 508 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 FUNDC1Q8IVP5 155 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 CCDC36Q8IYA8 594 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 PAQR4Q8N4S7 273 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-220ENST00000585031 GLB1L3Q8NCI6 653 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-220ENST00000585031 DEFB108BQ8NET1 73 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 OR8J2Q8NGG1 315 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 STMN2Q93045 179 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 RAB39BQ96DA2 213 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 SPDL1Q96EA4 605 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 KTI12Q96EK9 354 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-220ENST00000585031 TRNT1Q96Q11 434 aaKnown RBP15.36■□□□□ 0.05
TOP3A-220ENST00000585031 MMP26Q9NRE1 261 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 LEF1Q9UJU2 399 aaPredicted RBP15.36■□□□□ 0.05
TOP3A-220ENST00000585031 NOX1Q9Y5S8 564 aa15.36■□□□□ 0.05
TOP3A-220ENST00000585031 A0A1W2PPW3 197 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 CDHR4A6H8M9 788 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 CCDC154A6NI56 674 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 TRAF3IP2O43734 574 aaPredicted RBP15.35■□□□□ 0.05
TOP3A-220ENST00000585031 PATE4P0C8F1 98 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 IL7RP16871 459 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 RPS5P46782 204 aaKnown RBP15.35■□□□□ 0.05
TOP3A-220ENST00000585031 GIPRP48546 466 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 PTDSS1P48651 473 aaKnown RBP15.35■□□□□ 0.05
TOP3A-220ENST00000585031 CLNS1AP54105 237 aaKnown RBP15.35■□□□□ 0.05
TOP3A-220ENST00000585031 PSME3P61289 254 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 ERVS71-1P61550 626 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 BAMBIQ13145 260 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 RAB39AQ14964 217 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 C1orf146Q5VVC0 180 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 CARD17Q5XLA6 110 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 WBP2NLQ6ICG8 309 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 ZNF836Q6ZNA1 936 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 LRRC74BQ6ZQY2 392 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 RNF130Q86XS8 419 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 CLIP4Q8N3C7 705 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 MFSD8Q8NHS3 518 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 OXGR1Q96P68 337 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 DPY30Q9C005 99 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 DENND2DQ9H6A0 471 aaPredicted RBP15.35■□□□□ 0.05
TOP3A-220ENST00000585031 MTHFD2LQ9H903 347 aaPredicted RBP15.35■□□□□ 0.05
TOP3A-220ENST00000585031 TANC2Q9HCD6 1990 aa15.35■□□□□ 0.05
TOP3A-220ENST00000585031 PRSS51A0A1B0GVH4 220 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 FBP2O00757 339 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 FZD7O75084 574 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 HPRP00739 348 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 HLA-DOBP13765 273 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 UFM1P61960 85 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 RAB1AP62820 205 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 HPCAP84074 193 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 SLC9A3R2Q15599 337 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 COX20Q5RI15 118 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 PGM2L1Q6PCE3 622 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 NHLRC1Q6VVB1 395 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 ZNF813Q6ZN06 617 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 C20orf196Q8IYI0 205 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 HOPXQ9BPY8 73 aaPredicted RBP15.34■□□□□ 0.05
TOP3A-220ENST00000585031 SLC35A5Q9BS91 424 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 EMC6Q9BV81 110 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 HINT3Q9NQE9 182 aaKnown RBP15.34■□□□□ 0.05
TOP3A-220ENST00000585031 SLC7A8Q9UHI5 535 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 MMP24Q9Y5R2 645 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 DSPPQ9NZW4 1301 aa15.34■□□□□ 0.05
TOP3A-220ENST00000585031 IGHV1-69-2A0A0G2JMI3 117 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 CLDN34H7C241 214 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 NPPAP01160 153 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 DBIP07108 87 aaKnown RBP15.33■□□□□ 0.04
TOP3A-220ENST00000585031 B4GALT1P15291 398 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 KPNB1Q14974 876 aaKnown RBP15.33■□□□□ 0.04
TOP3A-220ENST00000585031 MFSD13AQ14CX5 517 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 NKPD1Q17RQ9 610 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 USP51Q70EK9 711 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 RHOUQ7L0Q8 258 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF627Q7L945 461 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 JAZF1Q86VZ6 243 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 PIK3C3Q8NEB9 887 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 STK35Q8TDR2 534 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 TAAR8Q969N4 342 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 CLPTM1LQ96KA5 538 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 CDRT15Q96T59 188 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 MMP27Q9H306 513 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 SPAG4Q9NPE6 437 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 NUP50Q9UKX7 468 aa15.33■□□□□ 0.04
TOP3A-220ENST00000585031 ZNF346Q9UL40 294 aaKnown RBP15.33■□□□□ 0.04
TOP3A-220ENST00000585031 IGLV3-9A0A075B6K5 115 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 MS4A18H0YCH9 400 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 TRAPPC2LH3BP13 241 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 M0R082 166 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 FAM157BP0CG42 384 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 CCL2P13500 99 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 UQCRBP14927 111 aa15.32■□□□□ 0.04
TOP3A-220ENST00000585031 CHI3L1P36222 383 aaPredicted RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms