RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 SERPINA6P08185 405 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CT45A8P0DMV1 189 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CT45A9P0DMV2 189 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 NELFEP18615 380 aaKnown RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC1A6P48664 564 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ATP4BP51164 291 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PRRX1P54821 245 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ISXQ2M1V0 245 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 HKDC1Q2TB90 917 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CT45A2Q5DJT8 189 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 COQ5Q5HYK3 327 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GPRC6AQ5T6X5 926 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PRAMEF20Q5VT98 475 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MLIPQ5VWP3 458 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ASPHD2Q6ICH7 369 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 RHBDD2Q6NTF9 364 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 DPY19L2P2Q6ZN68 376 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MBOAT1Q6ZNC8 495 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FRA10AC1Q70Z53 315 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SYT14Q8NB59 555 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SPATA4Q8NEY3 305 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52N5Q8NH56 324 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 CHPT1Q8WUD6 406 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SH3YL1Q96HL8 342 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 B3GALT6Q96L58 329 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 BMFQ96LC9 184 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 C9orf72Q96LT7 481 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF317Q96PQ6 595 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FMO2Q99518 471 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GPR22Q99680 433 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SH3GL1Q99961 368 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 SRMSQ9H3Y6 488 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PLEKHA3Q9HB20 300 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GLRX2Q9NS18 164 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 FLRT3Q9NZU0 649 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PSMC3IPQ9P2W1 217 aaPredicted RBP1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 PCSK1NQ9UHG2 260 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 GMEB1Q9Y692 573 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 AP4B1Q9Y6B7 739 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 MYO10Q9HD67 2058 aa1.68□□□□□ -2.14
SMCHD1-211ENST00000584897 TEP1Q99973 2627 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 NAV2Q8IVL1 2488 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FRYQ5TBA9 3013 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A096LPI6 279 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1B0GUH1 482 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1W2PN81 502 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM74A7A6NL05 159 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OR2AG2A6NM03 316 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 GOLGA8KD6RF30 607 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 PPIAL4DF5H284 164 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 K7ENP7 123 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 KLF11O14901 512 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 NUDT14O95848 222 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CRYAAP02489 173 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 EFNA1P20827 205 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TUBG1P23258 451 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CHRNA7P36544 502 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RPL4P36578 427 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 CDKN1AP38936 164 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 MAT1AQ00266 395 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC10A7Q0GE19 358 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 GANABQ14697 944 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 C3AR1Q16581 482 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 FAM74A3Q4VXF1 159 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ANXA8L1Q5VT79 327 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 MEDAGQ5VYS4 303 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 REP15Q6BDI9 236 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RFWD3Q6PCD5 774 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 Q6ZPB1 254 aaPredicted RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 COX8CQ7Z4L0 72 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 KCNMB4Q86W47 210 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 OR52B6Q8NGF0 335 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SFXN5Q8TD22 340 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RASSF5Q8WWW0 418 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 LCN9Q8WX39 176 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 MCUR1Q96AQ8 359 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC47A1Q96FL8 570 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SCMH1Q96GD3 660 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 PPP3R2Q96LZ3 170 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC22A12Q96S37 553 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 PEBP4Q96S96 227 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 RBBP8Q99708 897 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 C5orf66Q9H5L9 145 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ISG20L2Q9H9L3 353 aaKnown RBP1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ELOVL3Q9HB03 270 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 TUBG2Q9NRH3 451 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 AGPAT4Q9NRZ5 378 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 C2orf42Q9NWW7 574 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 KLHL28Q9NXS3 571 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 B4GALT7Q9UBV7 327 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ABCG2Q9UNQ0 655 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 SLC6A5Q9Y345 797 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 ZNF175Q9Y473 711 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 HEY1Q9Y5J3 304 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 N6AMT1Q9Y5N5 214 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 AUP1Q9Y679 476 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 DNAH12Q6ZR08 3092 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A087WWV3 80 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 A0A1B0GX78 115 aa1.67□□□□□ -2.14
SMCHD1-211ENST00000584897 METTL21EPA6NDL7 271 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms