RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 BMP5P22003 454 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 CRMP1Q14194 572 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 C6orf52Q5T4I8 152 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 TSPO2Q5TGU0 170 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 FBXW9Q5XUX1 488 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 TFAP2EQ6VUC0 442 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 CCDC71Q8IV32 467 aaPredicted RBP16.19■□□□□ 0.18
RFFL-211ENST00000584541 TCEANCQ8N8B7 351 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 NPEPL1Q8NDH3 523 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 OR8J1Q8NGP2 316 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 TFAP2CQ92754 450 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 CCDC120Q96HB5 630 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 SYT4Q9H2B2 425 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 Q9H521 79 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 FOXD3Q9UJU5 478 aaPredicted RBP16.19■□□□□ 0.18
RFFL-211ENST00000584541 RAB26Q9ULW5 256 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 SLC5A6Q9Y289 635 aa16.19■□□□□ 0.18
RFFL-211ENST00000584541 SETXQ7Z333 2677 aaKnown RBP16.18■□□□□ 0.18
RFFL-211ENST00000584541 ZNF587BE7ETH6 402 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 MSTNO14793 375 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 TLX2O43763 284 aaPredicted RBP16.18■□□□□ 0.18
RFFL-211ENST00000584541 UPK3AO75631 287 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 IGHV3-9P01782 118 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 QDPRP09417 244 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 CRABP1P29762 137 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 CHRNB4P30926 498 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 HIST3H3Q16695 136 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 ZNF362Q5T0B9 420 aaPredicted RBP16.18■□□□□ 0.18
RFFL-211ENST00000584541 ZNF691Q5VV52 312 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 BEND4Q6ZU67 534 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 WDFY1Q8IWB7 410 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 C8orf59Q8N0T1 100 aaPredicted RBP16.18■□□□□ 0.18
RFFL-211ENST00000584541 CYB561A3Q8NBI2 242 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 TMEM163Q8TC26 289 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 MCHR2Q969V1 340 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 IL4I1Q96RQ9 567 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 RPRD1BQ9NQG5 326 aaKnown RBP16.18■□□□□ 0.18
RFFL-211ENST00000584541 SLC7A10Q9NS82 523 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 H2AFY2Q9P0M6 372 aaPredicted RBP16.18■□□□□ 0.18
RFFL-211ENST00000584541 PRSS50Q9UI38 385 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 GPR52Q9Y2T5 361 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 KALRNO60229 2985 aa16.18■□□□□ 0.18
RFFL-211ENST00000584541 OR6C68A6NDL8 312 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 EEF1E1-BLOC1S5C9J1V9 151 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 EEF1E1O43324 174 aaKnown RBP16.17■□□□□ 0.18
RFFL-211ENST00000584541 PRKYO43930 277 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 SLC16A7O60669 478 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 CGAP01215 116 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 ZNF84P51523 738 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 SLC25A1P53007 311 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 ADORA2A-AS1P86434 159 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 IL5RAQ01344 420 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 FAPQ12884 760 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 PLBD1Q6P4A8 553 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 CXXC5Q7LFL8 322 aaKnown RBP16.17■□□□□ 0.18
RFFL-211ENST00000584541 MRGPRGQ86SM5 289 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 ZNF610Q8N9Z0 462 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 OR2T4Q8NH00 348 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 MUS81Q96NY9 551 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 ALKBH3Q96Q83 286 aaPredicted RBP16.17■□□□□ 0.18
RFFL-211ENST00000584541 OPN3Q9H1Y3 402 aaPredicted RBP16.17■□□□□ 0.18
RFFL-211ENST00000584541 RERGLQ9H628 205 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 MALT1Q9UDY8 824 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 FKBP7Q9Y680 259 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 HSPE1-MOB4S4R3N1 261 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 FREM1Q5H8C1 2179 aa16.17■□□□□ 0.18
RFFL-211ENST00000584541 NCOA6Q14686 2063 aaPredicted RBP16.17■□□□□ 0.18
RFFL-211ENST00000584541 RP1L1Q8IWN7 2480 aaPredicted RBP16.17■□□□□ 0.18
RFFL-211ENST00000584541 FAM183AA6NL82 134 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 M0R129 80 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 KHDRBS3O75525 346 aaKnown RBP16.16■□□□□ 0.18
RFFL-211ENST00000584541 CLIC3O95833 236 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 EDNRAP25101 427 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 EFNB1P98172 346 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 ROR2Q01974 943 aaKnown RBP16.16■□□□□ 0.18
RFFL-211ENST00000584541 FMODQ06828 376 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 LGALS3BPQ08380 585 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 SLC25A35Q3KQZ1 300 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 PHYHD1Q5SRE7 291 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 Q6ZT83 130 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 CPOQ8IVL8 374 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 DDOQ99489 341 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 RBM24Q9BX46 236 aaKnown RBP16.16■□□□□ 0.18
RFFL-211ENST00000584541 NUAK2Q9H093 628 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 CRLF2Q9HC73 371 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 GPR35Q9HC97 309 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 SRA1Q9HD15 236 aaKnown RBP16.16■□□□□ 0.18
RFFL-211ENST00000584541 HINT3Q9NQE9 182 aaKnown RBP16.16■□□□□ 0.18
RFFL-211ENST00000584541 RASSF1Q9NS23 344 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 ALPK2Q86TB3 2170 aa16.16■□□□□ 0.18
RFFL-211ENST00000584541 RPL36A-HNRNPH2H7BZ11 118 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 DHHO43323 396 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 GUCA1AP43080 201 aaPredicted RBP16.15■□□□□ 0.18
RFFL-211ENST00000584541 ZNF133P52736 654 aaPredicted RBP16.15■□□□□ 0.18
RFFL-211ENST00000584541 SNRPGP62308 76 aaKnown RBP16.15■□□□□ 0.18
RFFL-211ENST00000584541 STK11Q15831 433 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 C10orf128Q5T292 105 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 MEDAGQ5VYS4 303 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 LRFN4Q6PJG9 635 aa16.15■□□□□ 0.18
RFFL-211ENST00000584541 SLC25A47Q6Q0C1 308 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms