RNA–Protein interactions for RNA: ENST00000583363.5

CDK5RAP3-228, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-228ENST00000583363 CARD17Q5XLA6 110 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PLBD1Q6P4A8 553 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 C3P1Q6ZMU1 363 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CXXC5Q7LFL8 322 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NUFIP2Q7Z417 695 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 C20orf196Q8IYI0 205 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TMEM123Q8N131 208 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 APH1BQ8WW43 257 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TMEM54Q969K7 222 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 INTS12Q96CB8 462 aaKnown RBP14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 LRR1Q96L50 414 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NMNAT2Q9BZQ4 307 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 UBAP1Q9NZ09 502 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PCDHGB5Q9Y5G0 923 aa14.48□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FAM183AA6NL82 134 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PRR23D1E9PI22 279 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 H7C1C5 153 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 WBP4O75554 376 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 IL2RAP01589 272 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CRHP06850 196 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PRR23D2P0DMB1 279 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 AGTR1P30556 359 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 KIR2DL2P43627 348 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CLRN1P58418 232 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 LCN6P62502 163 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 THEM4Q5T1C6 240 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MEDAGQ5VYS4 303 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 LAIR2Q6ISS4 152 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FAM214BQ7L5A3 538 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 BCDIN3DQ7Z5W3 292 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SYT14Q8NB59 555 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NMD3Q96D46 503 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 Q96MT0 163 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ZFP3Q96NJ6 502 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 RBP7Q96R05 134 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 HCAR1Q9BXC0 346 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MED20Q9H944 212 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SRA1Q9HD15 236 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CLN6Q9NWW5 311 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 GLTPQ9NZD2 209 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FOXD3Q9UJU5 478 aaPredicted RBP14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 B9D1Q9UPM9 204 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CENPEQ02224 2701 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 DOCK7Q96N67 2140 aa14.47□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CRYBG3Q68DQ2 2970 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ARHGAP21Q5T5U3 1957 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 E9PLN8 166 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ENTPD6O75354 484 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SLC43A1O75387 559 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PAICSP22234 425 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CA7P43166 264 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CSNK1A1P48729 337 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CASP6P55212 293 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 TEKQ02763 1124 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PMPCAQ10713 525 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FOXF2Q12947 444 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MRPL49Q13405 166 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 EIF2S3LQ2VIR3 472 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 PHYHD1Q5SRE7 291 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 C6orf141Q5SZD1 244 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NXNL2Q5VZ03 156 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 LRFN4Q6PJG9 635 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 GCNT2Q8N0V5 402 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 OR6V1Q8N148 313 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NOXO1Q8NFA2 376 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 BBS1Q8NFJ9 593 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CNIH3Q8TBE1 160 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FNDC8Q8TC99 324 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 MCHR2Q969V1 340 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 OTULINQ96BN8 352 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ZNF582Q96NG8 517 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 VKORC1Q9BQB6 163 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 NUAK2Q9H093 628 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 SYT4Q9H2B2 425 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 RPRD1BQ9NQG5 326 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 ASB6Q9NWX5 421 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 H2AFY2Q9P0M6 372 aaPredicted RBP14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 OSGIN2Q9Y236 505 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 FKBP7Q9Y680 259 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 POLEQ07864 2286 aa14.46□□□□□ -0.09
CDK5RAP3-228ENST00000583363 CELSR2Q9HCU4 2923 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 TRGV8A0A0C4DH27 118 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 OR6C65A6NJZ3 312 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 M0R3G1 203 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 UPK3AO75631 287 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 STSP08842 583 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 TMIGD3P0DMS9 266 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 SLC2A5P22732 501 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 EDNRAP25101 427 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 COL8A1P27658 744 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZNF133P52736 654 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 PER3P56645 1201 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 RIPPLY2Q5TAB7 128 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZNF787Q6DD87 383 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 TMEM211Q6ICI0 200 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 KRT80Q6KB66 452 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 SLC25A47Q6Q0C1 308 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 MEPCEQ7L2J0 689 aaKnown RBP14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 ZBTB46Q86UZ6 589 aa14.45□□□□□ -0.1
CDK5RAP3-228ENST00000583363 OR9Q1Q8NGQ5 310 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms