RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 TMEM185BQ9H7F4 350 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 ISG20L2Q9H9L3 353 aaKnown RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 TXNL4BQ9NX01 149 aaKnown RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 ANKRD10Q9NXR5 420 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 B4GALT7Q9UBV7 327 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 FBXL2Q9UKC9 423 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 IKZF2Q9UKS7 526 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 BOKQ9UMX3 212 aaPredicted RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 TRAPPC4Q9Y296 219 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 FKBP7Q9Y680 259 aa8.35□□□□□ -1.07
SS18-220ENST00000582092 FASNP49327 2511 aaKnown RBP8.35□□□□□ -1.07
SS18-220ENST00000582092 TRBV2A0A0J9YWF9 115 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 J3QKU1 62 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 J3QRE1 110 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 KHDRBS3O75525 346 aaKnown RBP8.34□□□□□ -1.07
SS18-220ENST00000582092 C1QL1O75973 258 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 IGHMP01871 453 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 OPN1LWP04000 364 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 IFNGR1P15260 489 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 ZNF43P17038 809 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 GALP22466 123 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 CALRP27797 417 aaKnown RBP8.34□□□□□ -1.07
SS18-220ENST00000582092 TGFBR1P36897 503 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 BMXP51813 675 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 HCCSP53701 268 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 OR12D2P58182 307 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 SIRPAP78324 504 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 GLO1Q04760 184 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 MXD1Q05195 221 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 CCDC58Q4VC31 144 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 MESTQ5EB52 335 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 SPANXN2Q5MJ10 180 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 DCAF10Q5QP82 559 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 H3F3CQ6NXT2 135 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 RPL22L1Q6P5R6 122 aaKnown RBP8.34□□□□□ -1.07
SS18-220ENST00000582092 KCTD18Q6PI47 426 aaPredicted RBP8.34□□□□□ -1.07
SS18-220ENST00000582092 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.34□□□□□ -1.07
SS18-220ENST00000582092 GPAT4Q86UL3 456 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 EGFL6Q8IUX8 553 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 BEST3Q8N1M1 668 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 ARMC10Q8N2F6 343 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 GTPBP8Q8N3Z3 284 aaPredicted RBP8.34□□□□□ -1.07
SS18-220ENST00000582092 ZNF511Q8NB15 262 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 OR6Q1Q8NGQ2 317 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 ASB17Q8WXJ9 295 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 ABHD17AQ96GS6 310 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 ARL5BQ96KC2 179 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 FRMD6Q96NE9 622 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 OXGR1Q96P68 337 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 GNRHR2Q96P88 292 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 TSSK2Q96PF2 358 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 TM9SF2Q99805 663 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 KCNS3Q9BQ31 491 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 TTYH2Q9BSA4 534 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 HDHD5Q9BXW7 423 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 WDR76Q9H967 626 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 TIGARQ9NQ88 270 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 LRFN1Q9P244 771 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 ADAM30Q9UKF2 790 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 PIEZO2Q9H5I5 2752 aa8.34□□□□□ -1.07
SS18-220ENST00000582092 A0A1W2PNR3 127 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 TVP23AA6NH52 213 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 METTL15A6NJ78 407 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 CD8B2A6NJW9 211 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 FTCDNL1E5RQL4 147 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 NPIPA2E9PIF3 369 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 NPIPA3F8WFD2 350 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 MS4A18H0YCH9 400 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 MASP2O00187 686 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 ETV2O00321 342 aaPredicted RBP8.33□□□□□ -1.08
SS18-220ENST00000582092 ZNF593O00488 134 aaPredicted RBP8.33□□□□□ -1.08
SS18-220ENST00000582092 GABRPO00591 440 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 PMS2P2O95744 297 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 CD8BP10966 210 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 IMPDH2P12268 514 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 ZNF17P17021 662 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 GDF1P27539 372 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 SRD5A2P31213 254 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 FGF9P31371 208 aaPredicted RBP8.33□□□□□ -1.08
SS18-220ENST00000582092 CD79BP40259 229 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 OPRL1P41146 370 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 DNASE1L1P49184 302 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 BIDP55957 195 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 RAC1P63000 192 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 PLGLB1Q02325 96 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 ZNF85Q03923 595 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 Q0VFX4 171 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 KLRB1Q12918 225 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 MELKQ14680 651 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 INPP5JQ15735 1006 aaPredicted RBP8.33□□□□□ -1.08
SS18-220ENST00000582092 MS4A18Q3C1V0 323 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 CDONQ4KMG0 1287 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 ATP1A1-AS1Q5TC04 95 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 EEF1A1P5Q5VTE0 462 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 VASNQ6EMK4 673 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 SLC18B1Q6NT16 456 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 TUBA3EQ6PEY2 450 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 TMPPEQ6ZT21 453 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 KRT77Q7Z794 578 aa8.33□□□□□ -1.08
SS18-220ENST00000582092 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms