RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 CYB561P49447 251 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 CEBPDP49716 269 aaPredicted RBP2.57□□□□□ -2
SMCHD1-204ENST00000581226 UGT2B15P54855 530 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 SLC7A9P82251 487 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 ARHGAP19Q14CB8 494 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 LRRC74BQ6ZQY2 392 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 Q6ZR03 302 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 FAM92BQ6ZTR7 304 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 STRADAQ7RTN6 431 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 PEX26Q7Z412 305 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 CNPY4Q8N129 248 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 OR5W2Q8NH69 310 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 NT5C3BQ969T7 300 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 PLEKHA8Q96JA3 519 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 IFT74Q96LB3 600 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 TCEANC2Q96MN5 208 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 OR2A5Q96R48 311 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 CCT7Q99832 543 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 SPIN2AQ99865 258 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 SPIN2BQ9BPZ2 258 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 SLC39A3Q9BRY0 314 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 LINC00597Q9H2U6 94 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 ANKRD19PQ9H560 264 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 ZNF430Q9H8G1 570 aaPredicted RBP2.57□□□□□ -2
SMCHD1-204ENST00000581226 ZNF835Q9Y2P0 537 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 CENPJQ9HC77 1338 aaPredicted RBP2.57□□□□□ -2
SMCHD1-204ENST00000581226 WDR62O43379 1518 aa2.57□□□□□ -2
SMCHD1-204ENST00000581226 IGHV5-51A0A0C4DH38 117 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 A0A1W2PP18 115 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 ZNF726A6NNF4 738 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 SERPINE3A8MV23 424 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 HAS3O00219 553 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 FOXH1O75593 365 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 C2P06681 752 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 PRPS2P11908 318 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 AK4P27144 223 aaPredicted RBP2.56□□□□□ -2
SMCHD1-204ENST00000581226 EPS15P42566 896 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 KRTAP10-10P60014 251 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 IRX3P78415 501 aaPredicted RBP2.56□□□□□ -2
SMCHD1-204ENST00000581226 PRPSAP1Q14558 356 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 IMMTQ16891 758 aaKnown RBP2.56□□□□□ -2
SMCHD1-204ENST00000581226 ABCA11PQ4W5N1 156 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 VAX1Q5SQQ9 334 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 HES5Q5TA89 166 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 CEP112Q8N8E3 955 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 OR10G4Q8NGN3 311 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 ZNF721Q8TF20 911 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 SHC3Q92529 594 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 STMN2Q93045 179 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 WFIKKN1Q96NZ8 548 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 CTRCQ99895 268 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 TMEM59Q9BXS4 323 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 ZNF629Q9UEG4 869 aaPredicted RBP2.56□□□□□ -2
SMCHD1-204ENST00000581226 ZNF222Q9UK12 451 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 KIAA1257Q9ULG3 409 aa2.56□□□□□ -2
SMCHD1-204ENST00000581226 A0A1W2PPE3 182 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 H0YHG0 523 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 GAKO14976 1311 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 BET1O15155 118 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 CISD3P0C7P0 127 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 ZNF286BP0CG31 522 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 VHLP40337 213 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 RORCP51449 518 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 FBXW4P57775 412 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 ZNF77Q15935 545 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 LY6EQ16553 131 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 ZNF493Q6ZR52 646 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 TMEM179Q6ZVK1 233 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 EFL1Q7Z2Z2 1120 aaKnown RBP2.55□□□□□ -2
SMCHD1-204ENST00000581226 LHFPL3Q86UP9 236 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 SYNPRQ8TBG9 265 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 SH3GL3Q99963 347 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 SGK2Q9HBY8 427 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 OPN4Q9UHM6 478 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 NPTNQ9Y639 398 aa2.55□□□□□ -2
SMCHD1-204ENST00000581226 IGSF9BQ9UPX0 1349 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 A0A0B4J2A0 478 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 A0A1W2PPV9 198 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 BTBD17A6NE02 478 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 HIDE1A8MVS5 230 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 C1orf105O95561 183 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 SEC61GP60059 68 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 RAP1AP62834 184 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 ZNF92Q03936 586 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 PON3Q15166 354 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 STK11Q15831 433 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 NCCRP1Q6ZVX7 275 aaPredicted RBP2.54□□□□□ -2
SMCHD1-204ENST00000581226 ABHD13Q7L211 337 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 H2BFWTQ7Z2G1 175 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 TMEM135Q86UB9 458 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 TGIF2LXQ8IUE1 241 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 STPG2Q8N412 459 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 RNF182Q8N6D2 247 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 C15orf56Q8N910 161 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 BHLHE23Q8NDY6 225 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 DEDD2Q8WXF8 326 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 TMEM54Q969K7 222 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 C12orf42Q96LP6 360 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 SH3GL1Q99961 368 aa2.54□□□□□ -2
SMCHD1-204ENST00000581226 RTBDNQ9BSG5 229 aaPredicted RBP2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms