RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 MITFO75030 526 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-203ENST00000580986 SERPINI2O75830 405 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 HIST1H1CP16403 213 aaKnown RBP9.18□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF3P17036 446 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 PSMB1P20618 241 aaKnown RBP9.18□□□□□ -0.94
CCDC47-203ENST00000580986 BMP5P22003 454 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 MPGP29372 298 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 CRABP1P29762 137 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 ACVR1BP36896 505 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 HSPA13P48723 471 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 CSNK1A1P48729 337 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 CENPAP49450 140 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 ASCL1P50553 236 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 CLRN1P58418 232 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 SIRPAP78324 504 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 EFNB1P98172 346 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 MELKQ14680 651 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 GINS1Q14691 196 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 LRRC36Q1X8D7 754 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 CLEC12AQ5QGZ9 265 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 TSPO2Q5TGU0 170 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 TTC23Q5W5X9 447 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 ACSM5Q6NUN0 579 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 DNM1P34Q6PK57 102 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 SSX8Q7RTT4 187 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 GABRG1Q8N1C3 465 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 GPR137CQ8N3F9 429 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 NPEPL1Q8NDH3 523 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 C1orf162Q8NEQ5 155 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-203ENST00000580986 ITLN2Q8WWU7 325 aaPredicted RBP9.18□□□□□ -0.94
CCDC47-203ENST00000580986 HDAC2Q92769 488 aaKnown RBP9.18□□□□□ -0.94
CCDC47-203ENST00000580986 LRRC46Q96FV0 321 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 MBOAT4Q96T53 435 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 DDOQ99489 341 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 EMC6Q9BV81 110 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 HDHD5Q9BXW7 423 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 RACGAP1Q9H0H5 632 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 TOR3AQ9H497 397 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 SLC7A10Q9NS82 523 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 ASB6Q9NWX5 421 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 ELOVL5Q9NYP7 299 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 TAS2R16Q9NYV7 291 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 IL20RAQ9UHF4 553 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 FKBP7Q9Y680 259 aa9.18□□□□□ -0.94
CCDC47-203ENST00000580986 MYO18BQ8IUG5 2567 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 SLC22A23A1A5C7 686 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 RIIAD1A6NNX1 92 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF587BE7ETH6 402 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 CLDN14O95500 239 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 SNAP29O95721 258 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 RENP00797 406 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 IGFBP1P08833 259 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-203ENST00000580986 PAICSP22234 425 aaKnown RBP9.17□□□□□ -0.94
CCDC47-203ENST00000580986 PAX7P23759 505 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 POU1F1P28069 291 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 EPHA2P29317 976 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 GGT2P36268 569 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 VHLP40337 213 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 PEX19P40855 299 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 SLC25A1P53007 311 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 CDC42P60953 191 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 SORDQ00796 357 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 TGFBR3Q03167 851 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 RUNX1T1Q06455 604 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 TOP3AQ13472 1001 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-203ENST00000580986 IL18R1Q13478 541 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 CAMK2DQ13557 499 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 SLC25A30Q5SVS4 291 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 FOXL2NBQ6ZUU3 175 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 NCCRP1Q6ZVX7 275 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-203ENST00000580986 PTCHD4Q6ZW05 846 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 ZBTB46Q86UZ6 589 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 JAZF1Q86VZ6 243 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 CCDC71Q8IV32 467 aaPredicted RBP9.17□□□□□ -0.94
CCDC47-203ENST00000580986 LIX1LQ8IVB5 337 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 C17orf78Q8N4C9 275 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 FAM26EQ8N5C1 309 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 OR8J1Q8NGP2 316 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 OR6N1Q8NGY5 312 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 CA5BP1Q8WTZ4 195 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 RASD2Q96D21 266 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 RBP7Q96R05 134 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 ULBP2Q9BZM5 246 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 NMNAT2Q9BZQ4 307 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 RIBC2Q9H4K1 309 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 C12orf49Q9H741 205 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 FAM118AQ9NWS6 357 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 UPB1Q9UBR1 384 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 MYO7BQ6PIF6 2116 aa9.17□□□□□ -0.94
CCDC47-203ENST00000580986 LOC100130705A0A1B0GUX0 176 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ZNF99A8MXY4 864 aaPredicted RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 EEF1E1-BLOC1S5C9J1V9 151 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 PRODHO43272 600 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ARHGEF9O43307 516 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 EEF1E1O43324 174 aaKnown RBP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 MPZL2O60487 215 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 ZG16O60844 167 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 UPK3AO75631 287 aa9.16□□□□□ -0.94
CCDC47-203ENST00000580986 SMNDC1O75940 238 aaKnown RBP eCLIP9.16□□□□□ -0.94
CCDC47-203ENST00000580986 EDNRAP25101 427 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms