RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	DAG1	Q14118	895 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	RAB39A	Q14964	217 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	LAPTM4A	Q15012	233 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	EFNB3	Q15768	340 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	PIWIL3	Q7Z3Z3	882 aa	Known RBP	13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	CPLX4	Q7Z7G2	160 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	IGFN1	Q86VF2	1251 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	NRM	Q8IXM6	262 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	SVOPL	Q8N434	492 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	RNF148	Q8N7C7	305 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	OR4K5	Q8NGD3	323 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	LIPH	Q8WWY8	451 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	MCHR2	Q969V1	340 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	VRK1	Q99986	396 aa	Predicted RBP	13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	MRPL13	Q9BYD1	178 aa	Known RBP	13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	PLK3	Q9H4B4	646 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF442	Q9H7R0	627 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	EGFL7	Q9UHF1	273 aa		13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	FN1	P02751	2386 aa	Known RBP	13.42	□□□□□ -0.26
PMP22-208	ENST00000580584	PLCE1	Q9P212	2302 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	TRAV27	A0A087WT01	109 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584		A0A096LNT2	108 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	GMNC	A6NCL1	334 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584		B9A039	149 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	hCG_2039718	K7EN88	272 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	GPRIN2	O60269	458 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	PRSS23	O95084	383 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	SLC2A10	O95528	541 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	OR8G3P	P0DMU2	310 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	SAG	P10523	405 aa	Predicted RBP	13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	ACADS	P16219	412 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	NPR2	P20594	1047 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	PRDX6	P30041	224 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	DSCR9	P59020	149 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	PPP2R2B	Q00005	443 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	TRAM2	Q15035	370 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	HIST3H3	Q16695	136 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	KRTAP21-3	Q3LHN1	58 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	ALG10	Q5BKT4	473 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	ARMC4	Q5T2S8	1044 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF584	Q8IVC4	421 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	FAM168A	Q92567	244 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	SEPHS2	Q99611	448 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	SPAG4	Q9NPE6	437 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	ADA2	Q9NZK5	511 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	HIF3A	Q9Y2N7	669 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	FKBP7	Q9Y680	259 aa		13.41	□□□□□ -0.26
PMP22-208	ENST00000580584	NDUFAB1	O14561	156 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	F12	P00748	615 aa	Predicted RBP	13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF35	P13682	527 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	NR4A1	P22736	598 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	FMOD	Q06828	376 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	MSMP	Q1L6U9	139 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	TBPL2	Q6SJ96	375 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	ZNF730	Q6ZMV8	503 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	HDDC2	Q7Z4H3	204 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	TSEN54	Q7Z6J9	526 aa	Known RBP	13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	CDK20	Q8IZL9	346 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	ZCCHC24	Q8N2G6	241 aa	Known RBP	13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	FAM86B1	Q8N7N1	296 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	FAM156A	Q8NDB6	213 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	IL17RD	Q8NFM7	739 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	OR13C2	Q8NGS9	318 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	OR51A7	Q8NH64	312 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	C10orf105	Q8TEF2	133 aa		13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	HDAC2	Q92769	488 aa	Known RBP	13.4	□□□□□ -0.26
PMP22-208	ENST00000580584	TLN2	Q9Y4G6	2542 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584		A0A087WUU8	490 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	IGKV1D-43	A0A0B4J1Z2	117 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	SH3PXD2B	A1X283	911 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	EFCAB9	A8MZ26	197 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	FARS2	O95363	451 aa	Known RBP	13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	TP53	P04637	393 aa	Predicted RBP	13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	TCN1	P20061	433 aa	Predicted RBP	13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	CDA	P32320	146 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	GPR4	P46093	362 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	PPOX	P50336	477 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	ZNF84	P51523	738 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	CD47	Q08722	323 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	FHL1	Q13642	323 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	CARTPT	Q16568	116 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	CLDN22	Q8N7P3	220 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	ACOT11	Q8WXI4	607 aa	Predicted RBP	13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	NSMAF	Q92636	917 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	TXNIP	Q9H3M7	391 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	FZR1	Q9UM11	496 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	ENPP4	Q9Y6X5	453 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584		V9GYQ6	96 aa		13.39	□□□□□ -0.27
PMP22-208	ENST00000580584	TMEM129	A0AVI4	362 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	NPIPB13	A6NJU9	1138 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	NPIPB4	C9JG80	1138 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	CDC42EP2	O14613	210 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	SERPINA5	P05154	406 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	CSF3	P09919	207 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	CCL2	P13500	99 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	SLC25A16	P16260	332 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	PRKCD	Q05655	676 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	GKAP1	Q5VSY0	366 aa	Predicted RBP	13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	GLYAT	Q6IB77	296 aa		13.38	□□□□□ -0.27
PMP22-208	ENST00000580584	MBOAT2	Q6ZWT7	520 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms