RNA–Protein interactions for RNA: ENST00000579640.5

SS18-213, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,840 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-213ENST00000579640 FMO3P31513 532 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 ZNF133P52736 654 aaPredicted RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 CHN2P52757 468 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 PER3P56645 1201 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 STK11Q15831 433 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 RIPPLY2Q5TAB7 128 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 CARD17Q5XLA6 110 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 LAIR2Q6ISS4 152 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 UGT2A3Q6UWM9 527 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 POMGNT2Q8NAT1 580 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 SYT14Q8NB59 555 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 OR9Q1Q8NGQ5 310 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 APH1AQ96BI3 265 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 ZNF775Q96BV0 537 aaPredicted RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 NMD3Q96D46 503 aaKnown RBP9.52□□□□□ -0.89
SS18-213ENST00000579640 HCAR1Q9BXC0 346 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 LINC00470Q9BZP3 86 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 NUAK2Q9H093 628 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 OR51V1Q9H2C8 321 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 MED20Q9H944 212 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 AASSQ9UDR5 926 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 B9D1Q9UPM9 204 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 TPRKBQ9Y3C4 175 aa9.52□□□□□ -0.89
SS18-213ENST00000579640 ATRXP46100 2492 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 SHANK1Q9Y566 2161 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 IRGMA1A4Y4 181 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 SLC1A7O00341 560 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 SLC16A7O60669 478 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 FAM20BO75063 409 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 GLCEO94923 617 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 CEACAM8P31997 349 aaPredicted RBP9.51□□□□□ -0.89
SS18-213ENST00000579640 RPS7P62081 194 aaKnown RBP9.51□□□□□ -0.89
SS18-213ENST00000579640 APOFQ13790 326 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 KLHL12Q53G59 568 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 C10orf128Q5T292 105 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 TMEM211Q6ICI0 200 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 SEM1Q6ZVN7 128 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 BCDIN3DQ7Z5W3 292 aaKnown RBP9.51□□□□□ -0.89
SS18-213ENST00000579640 WDFY1Q8IWB7 410 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 ZNF100Q8IYN0 542 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 OR6V1Q8N148 313 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 GPR137CQ8N3F9 429 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 PROKR2Q8NFJ6 384 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 BBS1Q8NFJ9 593 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 BPIFB6Q8NFQ5 453 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 OR6K3Q8NGY3 331 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 MCHR2Q969V1 340 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 TTYH2Q9BSA4 534 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 SLCO5A1Q9H2Y9 848 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 SRA1Q9HD15 236 aaKnown RBP9.51□□□□□ -0.89
SS18-213ENST00000579640 HAO2Q9NYQ3 351 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 MYRFQ9Y2G1 1151 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 PCDHGB5Q9Y5G0 923 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 ZGRF1Q86YA3 2104 aa9.51□□□□□ -0.89
SS18-213ENST00000579640 MED12LQ86YW9 2145 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 DOCK7Q96N67 2140 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 IGLV1-36A0A0B4J1U3 117 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 CCDC182A6NF36 153 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 EFCAB10A6NFE3 127 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 E9PLN8 166 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 TNFAIP8O95379 198 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 QDPRP09417 244 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 TMIGD3P0DMS9 266 aaPredicted RBP9.5□□□□□ -0.89
SS18-213ENST00000579640 GLI4P10075 376 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 CTLA4P16410 223 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 NTF4P34130 210 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 OR3A2P47893 321 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 MTNR1AP48039 350 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 GABARAPL2P60520 117 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 GLO1Q04760 184 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 ZNF91Q05481 1191 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 POU4F2Q12837 409 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 SMN1Q16637 294 aaKnown RBP9.5□□□□□ -0.89
SS18-213ENST00000579640 KLHL22Q53GT1 634 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 SLC25A47Q6Q0C1 308 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 NUFIP2Q7Z417 695 aaKnown RBP9.5□□□□□ -0.89
SS18-213ENST00000579640 ABHD12BQ7Z5M8 362 aaPredicted RBP9.5□□□□□ -0.89
SS18-213ENST00000579640 IPCEF1Q8WWN9 437 aaPredicted RBP9.5□□□□□ -0.89
SS18-213ENST00000579640 TSSK2Q96PF2 358 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 TEAD3Q99594 435 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 VKORC1Q9BQB6 163 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 ULBP2Q9BZM5 246 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 MRPS18AQ9NVS2 196 aaKnown RBP9.5□□□□□ -0.89
SS18-213ENST00000579640 CNOT2Q9NZN8 540 aaKnown RBP9.5□□□□□ -0.89
SS18-213ENST00000579640 TINAGQ9UJW2 476 aa9.5□□□□□ -0.89
SS18-213ENST00000579640 HSPB2A8KAH6 182 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 DCTN6O00399 190 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 KRT33AO76009 404 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 TOXO94900 526 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 CNOT4O95628 575 aaKnown RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 GYPBP06028 91 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 CLUP10909 449 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 DBTP11182 482 aaKnown RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 PIPP12273 146 aaPredicted RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 CRHBPP24387 322 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 CA7P43166 264 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 KIR2DL2P43627 348 aaPredicted RBP9.49□□□□□ -0.89
SS18-213ENST00000579640 ZNF84P51523 738 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 NUDT6P53370 316 aa9.49□□□□□ -0.89
SS18-213ENST00000579640 FMODQ06828 376 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms