RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 ZNF696Q9H7X3 374 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 WARS2Q9UGM6 360 aaKnown RBP12.3□□□□□ -0.44
TSEN54-206ENST00000579449 PSORS1C1Q9UIG5 152 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 BLOC1S6Q9UL45 172 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.3□□□□□ -0.44
TSEN54-206ENST00000579449 B9D1Q9UPM9 204 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 ZNF835Q9Y2P0 537 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 NOSIPQ9Y314 301 aaKnown RBP12.3□□□□□ -0.44
TSEN54-206ENST00000579449 TPRKBQ9Y3C4 175 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 FKBP7Q9Y680 259 aa12.3□□□□□ -0.44
TSEN54-206ENST00000579449 SPTA1P02549 2419 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 NBEAQ8NFP9 2946 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 IGKV1D-43A0A0B4J1Z2 117 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 MAGEA13PA6NCF6 341 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 CD8B2A6NJW9 211 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 SLC22A31A6NKX4 558 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 PRRG2O14669 202 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 SLC16A7O60669 478 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 SLC43A1O75387 559 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 GLCEO94923 617 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 CTLA4P16410 223 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 EEF1B2P24534 225 aaKnown RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 CRABP1P29762 137 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 GSTT1P30711 240 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 PTGER4P35408 488 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 MTNR1AP48039 350 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 CSNK1A1P48729 337 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 CDH15P55291 814 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 TMED1Q13445 227 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 ETFDHQ16134 617 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 HIST3H3Q16695 136 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 SLC35D3Q5M8T2 416 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 PHYHD1Q5SRE7 291 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 THEM4Q5T1C6 240 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 C1orf185Q5T7R7 199 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 RTL6Q6ICC9 239 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 AHSA2Q719I0 299 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 ZBTB46Q86UZ6 589 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 C20orf196Q8IYI0 205 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 PROKR2Q8NFJ6 384 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 OR6N1Q8NGY5 312 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 CPT1CQ8TCG5 803 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 INTS12Q96CB8 462 aaKnown RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 NMD3Q96D46 503 aaKnown RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 ZMYND19Q96E35 227 aaPredicted RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 RNFT2Q96EX2 444 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 GP6Q9HCN6 339 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 GLRX2Q9NS18 164 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 MRPS18AQ9NVS2 196 aaKnown RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 FKBP14Q9NWM8 211 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 PAK1IP1Q9NWT1 392 aaPredicted RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 GLTPQ9NZD2 209 aa12.29□□□□□ -0.44
TSEN54-206ENST00000579449 FOXD3Q9UJU5 478 aaPredicted RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 SPENQ96T58 3664 aaKnown RBP12.29□□□□□ -0.44
TSEN54-206ENST00000579449 IGLV1-36A0A0B4J1U3 117 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 MBD3L4A6NDZ8 208 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 MBD3L3A6NE82 208 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 EFCAB10A6NFE3 127 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 MBD3L5A6NJ08 208 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 EIF4E1BA6NMX2 242 aaKnown RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 SS18L1O75177 396 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 MRPL33O75394 65 aaKnown RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 KHDRBS3O75525 346 aaKnown RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 APOL3O95236 402 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 HOXD4P09016 255 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 QDPRP09417 244 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 AGTR1P30556 359 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 GABARAPL2P60520 117 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 SLC35A2P78381 396 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 RBPJQ06330 500 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 PIGFQ07326 219 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 LINC01590Q5TEZ4 76 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 LCN1P1Q5VSP4 162 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 DNM1P34Q6PK57 102 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 SLC25A47Q6Q0C1 308 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 SEM1Q6ZVN7 128 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 DOLPP1Q86YN1 238 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 OR6K6Q8NGW6 343 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 MBD3L2Q8NHZ7 208 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 FNDC8Q8TC99 324 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 IPCEF1Q8WWN9 437 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 NSMAFQ92636 917 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 MCHR2Q969V1 340 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 LGALS12Q96DT0 336 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 GMPPAQ96IJ6 420 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 TM9SF2Q99805 663 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 RACGAP1Q9H0H5 632 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 DUSP21Q9H596 190 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 PARPBPQ9NWS1 579 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 CNOT2Q9NZN8 540 aaKnown RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 ERVK-18Q9QC07 812 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 MOKQ9UQ07 419 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 COA3Q9Y2R0 106 aaPredicted RBP12.28□□□□□ -0.44
TSEN54-206ENST00000579449 FAM215AQ9Y5M1 114 aa12.28□□□□□ -0.44
TSEN54-206ENST00000579449 TRIM64A6NGJ6 449 aa12.27□□□□□ -0.45
TSEN54-206ENST00000579449 ATXN7O15265 892 aaPredicted RBP12.27□□□□□ -0.45
TSEN54-206ENST00000579449 SLC19A2O60779 497 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms