RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 RPL18Q07020 188 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 PMS2P3Q13401 168 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ENDOGQ14249 297 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 GNA13Q14344 377 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 LAPTM4AQ15012 233 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 CARTPTQ16568 116 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 GSG1Q2KHT4 349 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 RSPO1Q2MKA7 263 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 KLF17Q5JT82 389 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SWT1Q5T5J6 900 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 AVPI1Q5T686 147 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 AGBL2Q5U5Z8 902 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF613Q6PF04 617 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC25A47Q6Q0C1 308 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 UGT2A3Q6UWM9 527 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 Q6ZR03 302 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 FOXL2NBQ6ZUU3 175 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 RFPL4BQ6ZWI9 263 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC35D2Q76EJ3 337 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 UEVLDQ8IX04 471 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 GPR137CQ8N3F9 429 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC22A24Q8N4F4 322 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 GOLGA6L1Q8N7Z2 621 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ZDHHC22Q8N966 263 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 LINC01356Q8N9X3 169 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 HIPK4Q8NE63 616 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 PIK3C3Q8NEB9 887 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 OR4K5Q8NGD3 323 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 OR5J2Q8NH18 312 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 VANGL1Q8TAA9 524 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 TMEM255BQ8WV15 326 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 DNAJA4Q8WW22 397 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 NEU4Q8WWR8 484 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 LIPHQ8WWY8 451 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 STON2Q8WXE9 905 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ASB10Q8WXI3 467 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 HPS1Q92902 700 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 DVL3Q92997 716 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 MCHR2Q969V1 340 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC47A1Q96FL8 570 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 MARS2Q96GW9 593 aaKnown RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 POM121L2Q96KW2 1035 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ZBTB18Q99592 522 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 C1QTNF5Q9BXJ0 243 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 WNT5BQ9H1J7 359 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 NARFLQ9H6Q4 476 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 RMND5AQ9H871 391 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SELENONQ9NZV5 590 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 LPAR3Q9UBY5 353 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 REV1Q9UBZ9 1251 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 TMEFF2Q9UIK5 374 aaPredicted RBP3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 SLC7A7Q9UM01 511 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 A4GNTQ9UNA3 340 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 ZNF232Q9UNY5 417 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 TRIM33Q9UPN9 1127 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 NOX1Q9Y5S8 564 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 PMF1-BGLAPU3KQ54 211 aa3.78□□□□□ -1.8
PPP4R1-209ENST00000578329 PRKDCP78527 4128 aaKnown RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 WNK1Q9H4A3 2382 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 LOC105371242A0A075B767 164 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 C5orf63A6NC05 138 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 C17orf100A8MU93 164 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 TRAPPC2LH3BP13 241 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 J3KTA2 159 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 KPNA4O00629 521 aaPredicted RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 CDC42EP2O14613 210 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 PLPP2O43688 288 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 EDF1O60869 148 aaKnown RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 SERPINI2O75830 405 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 ANP32DO95626 131 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 SNAP29O95721 258 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 IFNA2P01563 188 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 IGHV1-46P01743 117 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 IGHV3-13P01766 116 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 IGHV2-5P01817 119 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 C8BP07358 591 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 QDPRP09417 244 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 ADORA3P0DMS8 318 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 PSKH1P11801 424 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 H2AFXP16104 143 aaPredicted RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 ZNF32P17041 273 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 ADRA2CP18825 462 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 SLC6A2P23975 617 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 PCGF2P35227 344 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 OR1E2P47887 323 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 CSNK1A1P48729 337 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 COMPP49747 757 aaPredicted RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 ANXA11P50995 505 aaKnown RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 CHN2P52757 468 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 CCL8P80075 99 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 MRPS11P82912 194 aaKnown RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 PSG4Q00888 419 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 IL1RL1Q01638 556 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 GLO1Q04760 184 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 PIN1Q13526 163 aaPredicted RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 C1DQ13901 141 aaKnown RBP3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 SQLEQ14534 574 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 VMACQ2NL98 169 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 C10orf128Q5T292 105 aa3.77□□□□□ -1.81
PPP4R1-209ENST00000578329 XP32Q5T750 250 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms