RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 RTN4RQ9BZR6 473 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 DNTTIP1Q9H147 329 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 FGF20Q9NP95 211 aaPredicted RBP12.52□□□□□ -0.4
RNF43-202ENST00000577625 ICAM5Q9UMF0 924 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 EDARQ9UNE0 448 aa12.52□□□□□ -0.4
RNF43-202ENST00000577625 SPIN1Q9Y657 262 aaPredicted RBP12.52□□□□□ -0.4
RNF43-202ENST00000577625 CFAP54Q96N23 3096 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 OR6C65A6NJZ3 312 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 MTNR1AP48039 350 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 B3GNTL1Q67FW5 361 aaPredicted RBP12.52□□□□□ -0.41
RNF43-202ENST00000577625 PAPD4Q6PIY7 484 aaKnown RBP12.52□□□□□ -0.41
RNF43-202ENST00000577625 CBLN3Q6UW01 205 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 SHFQ7M4L6 423 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 SLC43A2Q8N370 569 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 COQ8AQ8NI60 647 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 OTULINQ96BN8 352 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 MRPS24Q96EL2 167 aaKnown RBP12.52□□□□□ -0.41
RNF43-202ENST00000577625 RNFT2Q96EX2 444 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 FN3KQ9H479 309 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 SLC6A5Q9Y345 797 aa12.52□□□□□ -0.41
RNF43-202ENST00000577625 SF3B6Q9Y3B4 125 aaKnown RBP12.52□□□□□ -0.41
RNF43-202ENST00000577625 WDFY3Q8IZQ1 3526 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.51□□□□□ -0.41
RNF43-202ENST00000577625 CDX4O14627 284 aaPredicted RBP12.51□□□□□ -0.41
RNF43-202ENST00000577625 SSNA1O43805 119 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 LANCL1O43813 399 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 RGS11O94810 467 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 AHCYP23526 432 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 CCKBRP32239 447 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 PNLIPRP2P54317 469 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 CDH11P55287 796 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 ST3GAL2Q16842 350 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 GSG1Q2KHT4 349 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 WBP2NLQ6ICG8 309 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 PAQR6Q6TCH4 344 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 TMEM205Q6UW68 189 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 THSD4Q6ZMP0 1018 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 OAFQ86UD1 273 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 ARL5BQ96KC2 179 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 NKX6-2Q9C056 277 aaPredicted RBP12.51□□□□□ -0.41
RNF43-202ENST00000577625 ENKD1Q9H0I2 346 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 ISYNA1Q9NPH2 558 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 HINT3Q9NQE9 182 aaKnown RBP12.51□□□□□ -0.41
RNF43-202ENST00000577625 MBD2Q9UBB5 411 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 EXTL2Q9UBQ6 330 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 GPN3Q9UHW5 284 aaPredicted RBP12.51□□□□□ -0.41
RNF43-202ENST00000577625 OTOGLQ3ZCN5 2332 aa12.51□□□□□ -0.41
RNF43-202ENST00000577625 TRAV27A0A087WT01 109 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 A0A1W2PQD3 144 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 L7N2F9 121 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 TOXO94900 526 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 SLC2A10O95528 541 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 CYC1P08574 325 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 GAAP10253 952 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 CD59P13987 128 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 GABRA5P31644 462 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 CAPZA2P47755 286 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 TPBGQ13641 420 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 SWI5Q1ZZU3 235 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 HFEQ30201 348 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 FAM69BQ5VUD6 431 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 FAM199XQ6PEV8 388 aaPredicted RBP12.5□□□□□ -0.41
RNF43-202ENST00000577625 CPEB2Q7Z5Q1 589 aaKnown RBP12.5□□□□□ -0.41
RNF43-202ENST00000577625 ZNF454Q8N9F8 522 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 OR1M1Q8NGA1 313 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 OR6S1Q8NH40 331 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 OR51A7Q8NH64 312 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 SGK3Q96BR1 496 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 LRFN5Q96NI6 719 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 BCL2L14Q9BZR8 327 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 LAT2Q9GZY6 243 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 METTL17Q9H7H0 456 aaPredicted RBP12.5□□□□□ -0.41
RNF43-202ENST00000577625 WDR54Q9H977 334 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 GPR160Q9UJ42 338 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 YARS2Q9Y2Z4 477 aaKnown RBP12.5□□□□□ -0.41
RNF43-202ENST00000577625 KNTC1P50748 2209 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 ALG1L2C9J202 215 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 GALR2O43603 387 aaPredicted RBP12.5□□□□□ -0.41
RNF43-202ENST00000577625 CCR4P51679 360 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 WNT4P56705 351 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 ZP1P60852 638 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 FHL1Q13642 323 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 CD200R1LQ6Q8B3 271 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 CXXC5Q7LFL8 322 aaKnown RBP12.5□□□□□ -0.41
RNF43-202ENST00000577625 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 OR52N1Q8NH53 320 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 ACOT12Q8WYK0 555 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 C8orf44Q96CB5 159 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 MS4A3Q96HJ5 214 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 LPAR4Q99677 370 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 KLHDC3Q9BQ90 382 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 IFT27Q9BW83 186 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 ULBP3Q9BZM4 244 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 CMC2Q9NRP2 79 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 CPAMD8Q8IZJ3 1885 aa12.5□□□□□ -0.41
RNF43-202ENST00000577625 PCNX2A6NKB5 2137 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 TRDV1A0A1B0GX56 115 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 FAM86C2PA6NEL3 165 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 C17orf51A8MQB3 221 aa12.49□□□□□ -0.41
RNF43-202ENST00000577625 IGF2P01344 180 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms