RNA–Protein interactions for RNA: ENST00000577541.1

TOP2A-202, Transcript of DNA topoisomerase II alpha, humanhuman

TSL 2

Gene TOP2A, Length 420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-202ENST00000577541 RAB3IL1Q8TBN0 382 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 PHF10Q8WUB8 498 aaKnown RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 ACOT11Q8WXI4 607 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 KIFAP3Q92845 792 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 SMARCD2Q92925 531 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 OR8B4Q96RC9 309 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 SRMSQ9H3Y6 488 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 NIPAL2Q9H841 368 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 NHEJ1Q9H9Q4 299 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 FGF20Q9NP95 211 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 DCAF16Q9NXF7 216 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 SPATA7Q9P0W8 599 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 XCL2Q9UBD3 114 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 MARCOQ9UEW3 520 aaPredicted RBP1.18□□□□□ -2.22
TOP2A-202ENST00000577541 NPTNQ9Y639 398 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 WDR62O43379 1518 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 INSRP06213 1382 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 CNTNAP1P78357 1384 aa1.18□□□□□ -2.22
TOP2A-202ENST00000577541 MAP3K15Q6ZN16 1313 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 CAMTA1Q9Y6Y1 1673 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 A0A0G2JN53 185 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 A0A0U1RQS6 177 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 A0A1B0GVI7 797 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 C11orf94C9JXX5 98 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 HIP1O00291 1037 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 CCL21O00585 134 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 GOSR2O14653 212 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 AGPAT2O15120 278 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 SS18L1O75177 396 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 PALMO75781 387 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 FGGP02679 453 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 PLEKP08567 350 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 TLX1NBP0CAT3 122 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF286BP0CG31 522 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 PNMA6AP0CW24 399 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 SLC2A3P11169 496 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 NCF2P19878 526 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 CNR1P21554 472 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ANXA13P27216 316 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 RFC4P35249 363 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 FDFT1P37268 417 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 VHLP40337 213 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 EPS15P42566 896 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ARRB1P49407 418 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 CEBPDP49716 269 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 RND2P52198 227 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 RPL23AP62750 156 aaKnown RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 TGM3Q08188 693 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 NCBP1Q09161 790 aaKnown RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 BST2Q10589 180 aaKnown RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 MESDQ14696 234 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ATP6AP1Q15904 470 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 Q5W150 140 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 OR52W1Q6IF63 320 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 TMEM220Q6QAJ8 160 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 MBOAT1Q6ZNC8 495 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 KRTAP13-1Q8IUC0 172 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 NUDCD3Q8IVD9 361 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 GTPBP8Q8N3Z3 284 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 STPG2Q8N412 459 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF557Q8N988 423 aaPredicted RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 FBXL13Q8NEE6 735 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 OR4F15Q8NGB8 312 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 OR2L8Q8NGY9 312 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ACMSDQ8TDX5 336 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 SGK3Q96BR1 496 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 SEC22AQ96IW7 307 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 CEP170P1Q96L14 293 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 TCHPQ9BT92 498 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 RIOK2Q9BVS4 552 aaKnown RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 PLA2G2FQ9BZM2 168 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 RACGAP1Q9H0H5 632 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 DNTTIP1Q9H147 329 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ING2Q9H160 280 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 CLMPQ9H6B4 373 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 NT5MQ9NPB1 228 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 KLHL28Q9NXS3 571 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 COX16Q9P0S2 106 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 PEX16Q9Y5Y5 336 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 MRPS18BQ9Y676 258 aaKnown RBP1.17□□□□□ -2.22
TOP2A-202ENST00000577541 CARMIL3Q8ND23 1372 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 ITGB4P16144 1822 aa1.17□□□□□ -2.22
TOP2A-202ENST00000577541 PLAC8L1A1L4L8 177 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 H0YHG0 523 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 PPP1R2P9O14990 202 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 RNF13O43567 381 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SUPT3HO75486 399 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 CLPXO76031 633 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SCGNO76038 276 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 UTS2O95399 124 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 CLIC3O95833 236 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ALDOBP05062 364 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 SERPIND1P05546 499 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ANXA5P08758 320 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 GIPP09681 153 aaPredicted RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 HSMCR30P0CW71 290 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 DBTP11182 482 aaKnown RBP1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ZNF250P15622 560 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 TUBG1P23258 451 aa1.16□□□□□ -2.22
TOP2A-202ENST00000577541 ATP5C1P36542 298 aaKnown RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms