RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 CALCRP30988 508 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 RPS5P46782 204 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 SLC6A9P48067 706 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 GZMKP49863 264 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 POLR2JP52435 117 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 CRISP3P54108 245 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 CLDN17P56750 224 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 DSCR9P59020 149 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 COPZ1P61923 177 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 ARF1P84077 181 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 VLDLRP98155 873 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 ROR2Q01974 943 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 TGFBR3Q03167 851 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 CHRNB3Q05901 458 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 LARS2Q15031 903 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 ADIPOQQ15848 244 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 GFOD2Q3B7J2 385 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 ZNF311Q5JNZ3 666 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 PHYHD1Q5SRE7 291 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 C6orf10Q5SRN2 563 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 RNF220Q5VTB9 566 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 PRAMEF8Q5VWM4 474 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 PRAMEF7Q5VXH5 474 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 CYB5R2Q6BCY4 276 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 ANKRD16Q6P6B7 361 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 KLHL24Q6TFL4 600 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 WDFY1Q8IWB7 410 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 MSRB3Q8IXL7 192 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 ZNF440Q8IYI8 595 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 ZCCHC24Q8N2G6 241 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 MIER2Q8N344 545 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 POMGNT2Q8NAT1 580 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 GTF2H4Q92759 462 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 KTI12Q96EK9 354 aaPredicted RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 ITCHQ96J02 903 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 MAELQ96JY0 434 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 FOXN4Q96NZ1 517 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 SLC38A2Q96QD8 506 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 VRK1Q99986 396 aaPredicted RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 SF3B5Q9BWJ5 86 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 BEX2Q9BXY8 128 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 PAIP1Q9H074 479 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 CHODLQ9H9P2 273 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 THAP1Q9NVV9 213 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 TMEM45AQ9NWC5 275 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 CHCHD3Q9NX63 227 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 RAB21Q9UL25 225 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 RRP15Q9Y3B9 282 aaKnown RBP5.39□□□□□ -1.55
NUP88-212ENST00000576708 RTTNQ86VV8 2226 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 ABCA1O95477 2261 aa5.39□□□□□ -1.55
NUP88-212ENST00000576708 IGKV1D-42A0A075B6H8 117 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 SH3PXD2BA1X283 911 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 LRP5LA4QPB2 252 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 ZNF587BE7ETH6 402 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 CLIC1O00299 241 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 UBDO15205 165 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 TPST1O60507 370 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 LMX1BO60663 402 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 AHSA1O95433 338 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 HPRP00739 348 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 GASTP01350 101 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 IFNA2P01563 188 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 IGFBP1P08833 259 aaPredicted RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 OR4A8P0C604 315 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 ZCCHC18P0CG32 403 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 FAM157CP0CG43 387 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 HLA-DOBP13765 273 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 HOXB9P17482 250 aaPredicted RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 IGFBP5P24593 272 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 HTR2AP28223 471 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 GRPRP30550 384 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 THBS4P35443 961 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 SERPINF1P36955 418 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 NR4A2P43354 598 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 PDLIM4P50479 330 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 IDH3GP51553 393 aaPredicted RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 MAP2K6P52564 334 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 UBE2NP61088 152 aaKnown RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 MAGOHP61326 146 aaKnown RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 SNRPD2P62316 118 aaKnown RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 TXNL4AP83876 142 aaKnown RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 IL1RL1Q01638 556 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 NAAAQ02083 359 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 LRRC74AQ0VAA2 488 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 RGNQ15493 299 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 KRTAP24-1Q3LI83 254 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 CARD17Q5XLA6 110 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 Q6ZSN1 163 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 SLC46A3Q7Z3Q1 461 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 FUNDC1Q8IVP5 155 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 KIRREL3Q8IZU9 778 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 SVOPLQ8N434 492 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 MFSD8Q8NHS3 518 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 NFKBIDQ8NI38 313 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 TMEM158Q8WZ71 300 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 PROX1Q92786 737 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 TAAR8Q969N4 342 aa5.38□□□□□ -1.55
NUP88-212ENST00000576708 MSI2Q96DH6 328 aaKnown RBP5.38□□□□□ -1.55
NUP88-212ENST00000576708 BOD1Q96IK1 185 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms