RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 FAM221BA6H8Z2 402 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 TXNDC12O95881 172 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 FBXO45P0C2W1 286 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 PNMTP11086 282 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 ATF4P18848 351 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 KIR3DL2P43630 455 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 IGLV3-21P80748 117 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 B3GNTL1Q67FW5 361 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 SDR16C5Q8N3Y7 309 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 OR6M1Q8NGM8 313 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 SCARB1Q8WTV0 552 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 KTI12Q96EK9 354 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 MRGPRX1Q96LB2 322 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 CHST6Q9GZX3 395 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 COMMD4Q9H0A8 199 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 TRAV18A0A075B6X5 111 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 LGALS8O00214 317 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 BET1O15155 118 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 SNAPC5O75971 98 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 CSF1P09603 554 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 ATXN8OSP0DMR3 200 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 BTN1A1Q13410 526 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 MELKQ14680 651 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 FNDC7Q5VTL7 733 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 MCATQ8IVS2 390 aaKnown RBP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF440Q8IYI8 595 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF615Q8N8J6 731 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 ZBTB44Q8NCP5 570 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 OR6N1Q8NGY5 312 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 PHOSPHO1Q8TCT1 267 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 GPBAR1Q8TDU6 330 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 MCHR2Q969V1 340 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 ELF4Q99607 663 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 NKX3-1Q99801 234 aaPredicted RBP17.28■□□□□ 0.36
SCARF1-206ENST00000573852 SZT2Q5T011 3432 aa17.28■□□□□ 0.36
SCARF1-206ENST00000573852 TMEM272A0A1B0GTI8 110 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 TMEM212A6NML5 194 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 F5H5P2 479 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 ITGA5P08648 1049 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 GTF2F2P13984 249 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 PPP3CBP16298 524 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 CALCRP30988 508 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 FUT7Q11130 342 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 SKP2Q13309 424 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 MED25Q71SY5 747 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 OOSP2Q86WS3 158 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 OR13H1Q8NG92 308 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 LHFPL5Q8TAF8 219 aa17.27■□□□□ 0.36
SCARF1-206ENST00000573852 ATOH1Q92858 354 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-206ENST00000573852 DVL3Q92997 716 aaPredicted RBP17.27■□□□□ 0.36
SCARF1-206ENST00000573852 ZNF432O94892 652 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 POU3F4P49335 361 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 SCAND1P57086 179 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 SLC22A18ASQ8N1D0 253 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 DNAJA3Q96EY1 480 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 SHARPINQ9H0F6 387 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 SYT4Q9H2B2 425 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 SEMA6CQ9H3T2 930 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 FBRSQ9HAH7 460 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 TAS2R8Q9NYW2 309 aa17.27■□□□□ 0.35
SCARF1-206ENST00000573852 A8MXK9 166 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 CLPSP04118 112 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 CSF2RBP32927 897 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 PRTGQ2VWP7 1150 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 WDR38Q5JTN6 314 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 OR8S1Q8NH09 359 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 C4orf45Q96LM5 186 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 MS4A7Q9GZW8 240 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-206ENST00000573852 MRPS33Q9Y291 106 aaKnown RBP17.26■□□□□ 0.35
SCARF1-206ENST00000573852 NUP210LQ5VU65 1888 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 TCRBV16S1A1N1A0A5B0 115 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 IGF2P01344 180 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 CD3DP04234 171 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 EGR3Q06889 387 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 C2orf76Q3KRA6 126 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 EEF1A1P5Q5VTE0 462 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 GSG1LQ6UXU4 331 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 METTL27Q8N6F8 245 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-206ENST00000573852 TAAR8Q969N4 342 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 DCBLD2Q96PD2 775 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 CCNL2Q96S94 520 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-206ENST00000573852 TTYH1Q9H313 450 aaPredicted RBP17.26■□□□□ 0.35
SCARF1-206ENST00000573852 EXOSC3Q9NQT5 275 aaKnown RBP17.26■□□□□ 0.35
SCARF1-206ENST00000573852 KCNG2Q9UJ96 466 aa17.26■□□□□ 0.35
SCARF1-206ENST00000573852 CHURC1-FNTBB4DL54 471 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 RAD1O60671 282 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 TNFP01375 233 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 AKAIN1P0CW23 69 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 YPEL5P62699 121 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 PM20D2Q8IYS1 436 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 TNFAIP8L1Q8WVP5 186 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 INTS14Q96SY0 518 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 TMEM138Q9NPI0 162 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 SESN1Q9Y6P5 492 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 SLC22A23A1A5C7 686 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 GK2Q14410 553 aaPredicted RBP17.25■□□□□ 0.35
SCARF1-206ENST00000573852 TSSK4Q6SA08 328 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 OVCH2Q7RTZ1 564 aa17.25■□□□□ 0.35
SCARF1-206ENST00000573852 NAXDQ8IW45 347 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms