RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 CLPPQ16740 277 aaPredicted RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 DUSP7Q16829 419 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 HNRNPA1L2Q32P51 320 aaKnown RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 SPOUT1Q5T280 376 aaKnown RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 ATAD3CQ5T2N8 411 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 TMEM215Q68D42 235 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SLC35E4Q6ICL7 350 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 RPL13AP3Q6NVV1 102 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 MZT2BQ6NZ67 158 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SLC27A4Q6P1M0 643 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 ZNF730Q6ZMV8 503 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 RASSF6Q6ZTQ3 369 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 DGLUCYQ7Z3D6 616 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SNX29P2Q8IUI4 249 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 TRAPPC5Q8IUR0 188 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 ZNF547Q8IVP9 402 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SLC34A3Q8N130 599 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 RNF175Q8N4F7 328 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 ASCC1Q8N9N2 400 aaKnown RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 ZNF485Q8NCK3 441 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 FAM83FQ8NEG4 500 aaPredicted RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 OR4K5Q8NGD3 323 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 OR10V1Q8NGI7 309 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 OR52I1Q8NGK6 324 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 TEX47Q8TBZ9 253 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SLC7A13Q8TCU3 470 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 OR8D1Q8WZ84 308 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SLC7A6Q92536 515 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 OSTF1Q92882 214 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 UFD1Q92890 307 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 TM4SF18Q96CE8 201 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 OTUB1Q96FW1 271 aaPredicted RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 SLC35G5Q96KT7 338 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SOSTQ9BQB4 213 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 SRSF8Q9BRL6 282 aaKnown RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 TSSK6Q9BXA6 273 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 GON7Q9BXV9 100 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 OR51B5Q9H339 312 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 FN3KQ9H479 309 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 POLE4Q9NR33 117 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 INPP5EQ9NRR6 644 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 MAN2C1Q9NTJ4 1040 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 TXNL4BQ9NX01 149 aaKnown RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 QPCTLQ9NXS2 382 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 MRPL39Q9NYK5 338 aaKnown RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 RABL2AQ9UBK7 228 aaPredicted RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 ABT1Q9ULW3 272 aaKnown RBP4.28□□□□□ -1.72
CDC27-215ENST00000573550 SNX7Q9UNH6 387 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 RABL2BQ9UNT1 228 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 GSTK1Q9Y2Q3 226 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 PCNTO95613 3336 aa4.28□□□□□ -1.72
CDC27-215ENST00000573550 CCDC88CQ9P219 2028 aa4.28□□□□□ -1.73
CDC27-215ENST00000573550 A0A1B0GTQ1 180 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 MEIOCA2RUB1 952 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 KRT87PA6NCN2 255 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 CENPXA8MT69 81 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 HEPACAM2A8MVW5 462 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 ANHXE9PGG2 379 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 H3BN98 237 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 CTDSP2O14595 271 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 FMO6PO60774 539 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 SLC19A2O60779 497 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 OR5F1O95221 314 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 GUSBP08236 651 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 CLTBP09497 229 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 TSPAN19P0C672 248 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 CISD3P0C7P0 127 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 ADRB3P13945 408 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 SPNP16150 400 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 MMP11P24347 488 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 GTF2E2P29084 291 aaKnown RBP4.27□□□□□ -1.73
CDC27-215ENST00000573550 ERP29P30040 261 aaKnown RBP4.27□□□□□ -1.73
CDC27-215ENST00000573550 TGFBR1P36897 503 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 SOX3P41225 446 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 GPR1P46091 355 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 CCT3P49368 545 aaKnown RBP4.27□□□□□ -1.73
CDC27-215ENST00000573550 TAS2R43P59537 309 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 IFITM2Q01629 132 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 MC1RQ01726 317 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 ST3GAL3Q11203 375 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 GANABQ14697 944 aaKnown RBP4.27□□□□□ -1.73
CDC27-215ENST00000573550 TRAM2Q15035 370 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 TAB1Q15750 504 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 GPAT3Q53EU6 434 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 EIPR1Q53HC9 387 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 PDZK1Q5T2W1 519 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 CCNJQ5T5M9 372 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 C1QTNF12Q5T7M4 302 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 LCN1P1Q5VSP4 162 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 FAM46CQ5VWP2 391 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 NXNL2Q5VZ03 156 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 THOC7Q6I9Y2 204 aaKnown RBP4.27□□□□□ -1.73
CDC27-215ENST00000573550 PODNL1Q6PEZ8 512 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 WASH2PQ6VEQ5 465 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 C6orf120Q7Z4R8 191 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 NRARPQ7Z6K4 114 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 AMZ2Q86W34 360 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 PLCZ1Q86YW0 608 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 GID4Q8IVV7 300 aa4.27□□□□□ -1.73
CDC27-215ENST00000573550 LAX1Q8IWV1 398 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms