RNA–Protein interactions for RNA: ENST00000572369.5

SMG6-211, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-211ENST00000572369 PGA4P0DJD7 388 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 PGA3P0DJD8 388 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 HOXB1P14653 301 aaPredicted RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 ACADSP16219 412 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 FUT4P22083 530 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 PAX7P23759 505 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 CD40P25942 277 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 ACVR1BP36896 505 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 CDH11P55287 796 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 RPL27P61353 136 aaKnown RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 LSM11P83369 360 aaKnown RBP eCLIP6.8□□□□□ -1.32
SMG6-211ENST00000572369 PPP2R2BQ00005 443 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 MS4A2Q01362 244 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 TRAP1Q12931 704 aaKnown RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 NPRL3Q12980 569 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 FLOT2Q14254 428 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 ZBED5Q49AG3 693 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 PHYHD1Q5SRE7 291 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 C1QTNF12Q5T7M4 302 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 LCN8Q6JVE9 175 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 C20orf204Q6ZNR8 217 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 TMPRSS11FQ6ZWK6 438 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 TSEN54Q7Z6J9 526 aaKnown RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 SPATA24Q86W54 205 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 CCDC36Q8IYA8 594 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 WDR31Q8NA23 367 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 SYT14Q8NB59 555 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 NOXO1Q8NFA2 376 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 OR4K5Q8NGD3 323 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 TMEM171Q8WVE6 324 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 ASB10Q8WXI3 467 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 BCL2L2Q92843 193 aaPredicted RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 TMEM54Q969K7 222 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 PIGTQ969N2 578 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 ZNF837Q96EG3 531 aaPredicted RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 SLC38A2Q96QD8 506 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 ALPK1Q96QP1 1244 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 KCNN2Q9H2S1 579 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 TXNIPQ9H3M7 391 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 RNF121Q9H920 327 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 MOV10Q9HCE1 1003 aaKnown RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 FAIMQ9NVQ4 179 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 CISD1Q9NZ45 108 aaKnown RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 GRHPRQ9UBQ7 328 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 ZNF346Q9UL40 294 aaKnown RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 ATP23Q9Y6H3 246 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 HEATR1Q9H583 2144 aaKnown RBP6.8□□□□□ -1.32
SMG6-211ENST00000572369 RYR3Q15413 4870 aa6.8□□□□□ -1.32
SMG6-211ENST00000572369 KMT2CQ8NEZ4 4911 aaKnown RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 ARPC4-TTLL3A0A0A6YYG9 625 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 TCRBV5S2A0A599 114 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 SH3PXD2BA1X283 911 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 A6NIZ1 184 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 INAFM1C9JVW0 142 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 TNFRSF11BO00300 401 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 CDC42EP2O14613 210 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 ARHGEF9O43307 516 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 DHHO43323 396 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 SPRY1O43609 319 aaPredicted RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 SMPD2O60906 423 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 TRMUO75648 421 aaKnown RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 KRT36O76013 467 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 NDUFB2O95178 105 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 ATE1O95260 518 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 RAB36O95755 333 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 CRYAAP02489 173 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 OR8G3PP0DMU2 310 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 RAP2AP10114 183 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 B4GALT1P15291 398 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 CD53P19397 219 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 LOXP28300 417 aaPredicted RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 PTDSS1P48651 473 aaKnown RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 FABP6P51161 128 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 IDH3GP51553 393 aaPredicted RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 RAP1BP61224 184 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 RAP1AP62834 184 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 ERVK-25P63136 954 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 PIGFQ07326 219 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 BNIP1Q12981 228 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 SEC23BQ15437 767 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 GSG1Q2KHT4 349 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 DEFB113Q30KQ7 82 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 ZNF672Q499Z4 452 aaPredicted RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 FAM205BPQ63HN1 556 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 PIWIL3Q7Z3Z3 882 aaKnown RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 WDFY1Q8IWB7 410 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 SLC22A24Q8N4F4 322 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 ZNF611Q8N823 705 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 FNDC8Q8TC99 324 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 MAGEE2Q8TD90 523 aaPredicted RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 GNPDA2Q8TDQ7 276 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 NSMAFQ92636 917 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 NEUROG1Q92886 237 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 MCHR2Q969V1 340 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 GTPBP3Q969Y2 492 aaKnown RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 RSRC1Q96IZ7 334 aaKnown RBP6.79□□□□□ -1.32
SMG6-211ENST00000572369 ZNF570Q96NI8 536 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 RBP7Q96R05 134 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 TMEM204Q9BSN7 226 aa6.79□□□□□ -1.32
SMG6-211ENST00000572369 KATNB1Q9BVA0 655 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms