RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 BMXP51813 675 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 CAPZA1P52907 286 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 MAPK12P53778 367 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 NAGLUP54802 743 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 CDK16Q00536 496 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TAF1AQ15573 450 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 LRRC36Q1X8D7 754 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 ZBED5Q49AG3 693 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TEX44Q53QW1 395 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SYT14P1Q58G82 188 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SEL1L2Q5TEA6 688 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SHQ1Q6PI26 577 aaKnown RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 UGT2A3Q6UWM9 527 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SNX20Q7Z614 316 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 ADAMTSL2Q86TH1 951 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 MEX3DQ86XN8 651 aaKnown RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 CENPSQ8N2Z9 138 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 LIX1Q8N485 282 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 PLPP5Q8NEB5 264 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 OR13J1Q8NGT2 312 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SGMS2Q8NHU3 365 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 FGFBP3Q8TAT2 258 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 C10orf82Q8WW14 230 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 PEX13Q92968 403 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 NCLNQ969V3 563 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 OTUB1Q96FW1 271 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 ART5Q96L15 291 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 COQ7Q99807 217 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 FAM173AQ9BQD7 235 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 THUMPD3Q9BV44 507 aaKnown RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 GON7Q9BXV9 100 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 OPN3Q9H1Y3 402 aaPredicted RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TRABDQ9H4I3 376 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SP140LQ9H930 580 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 IL1RL2Q9HB29 575 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 EML4Q9HC35 981 aaKnown RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 ANKHQ9HCJ1 492 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 S100A14Q9HCY8 104 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 DDX18Q9NVP1 670 aaKnown RBP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 EMC3Q9P0I2 261 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 MBD2Q9UBB5 411 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TAC3Q9UHF0 121 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TMCC3Q9ULS5 477 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 LIPT1Q9Y234 373 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.63□□□□□ -1.67
SF3B3-214ENST00000572365 NAALAD2Q9Y3Q0 740 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 TIMM22Q9Y584 194 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 POMT1Q9Y6A1 747 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 MAD1L1Q9Y6D9 718 aa4.63□□□□□ -1.67
SF3B3-214ENST00000572365 IGLV3-16A0A075B6K0 115 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 A0A1B0GUV1 79 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 A0A1W2PRB8 838 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 OR6C76A6NM76 312 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 E9PI62 339 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 TXNDC9O14530 226 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ACOT8O14734 319 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KLF11O14901 512 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 CHST10O43529 356 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 LCMT2O60294 686 aaKnown RBP4.62□□□□□ -1.67
SF3B3-214ENST00000572365 SULT1C4O75897 302 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KRT36O76013 467 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 TTC4O95801 387 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 BAG2O95816 211 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 HMGN1P05114 100 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 SERPIND1P05546 499 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KRT8P05787 483 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 CSN3P07498 182 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 H2AFZP0C0S5 128 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 IGHV4-31P0DP07 118 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ETS2P15036 469 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 STMN1P16949 149 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ADRA2CP18825 462 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 SERPINB1P30740 379 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 RPA3P35244 121 aaPredicted RBP4.62□□□□□ -1.67
SF3B3-214ENST00000572365 OPRM1P35372 400 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 TIMP3P35625 211 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 COILP38432 576 aaPredicted RBP4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ALDH3B2P48448 385 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 PLTPP55058 493 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 B2MP61769 119 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ACTG1P63261 375 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 CX3CL1P78423 397 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 SCN1BQ07699 218 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KLHL30Q0D2K2 578 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 APOFQ13790 326 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 PTK6Q13882 451 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KCNJ8Q15842 424 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 IZUMO4Q1ZYL8 232 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 EXOC3L2Q2M3D2 409 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KLHL38Q2WGJ6 581 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 KCTD21Q4G0X4 260 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 PDSS1Q5T2R2 415 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 CYB5R2Q6BCY4 276 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 SPSB3Q6PJ21 355 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 CCDC137Q6PK04 289 aaKnown RBP4.62□□□□□ -1.67
SF3B3-214ENST00000572365 FOXL2NBQ6ZUU3 175 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 H2AFVQ71UI9 128 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 NUP54Q7Z3B4 507 aa4.62□□□□□ -1.67
SF3B3-214ENST00000572365 ZNF571Q7Z3V5 609 aaPredicted RBP4.62□□□□□ -1.67
SF3B3-214ENST00000572365 SPATA19Q7Z5L4 167 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms