RNA–Protein interactions for RNA: ENST00000571554.5

RAB40B-204, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB40B, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-204ENST00000571554 UBL3O95164 117 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 NPPAP01160 153 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 IGFBP1P08833 259 aaPredicted RBP11.86□□□□□ -0.51
RAB40B-204ENST00000571554 LYNX1P0DP58 116 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 CCL2P13500 99 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 ZNF35P13682 527 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 TCN1P20061 433 aaPredicted RBP11.86□□□□□ -0.51
RAB40B-204ENST00000571554 KDELR2P33947 212 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 TOP3AQ13472 1001 aaPredicted RBP11.86□□□□□ -0.51
RAB40B-204ENST00000571554 IQCCQ4KMZ1 466 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 GKAP1Q5VSY0 366 aaPredicted RBP11.86□□□□□ -0.51
RAB40B-204ENST00000571554 CYB5R2Q6BCY4 276 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 IL17RELQ6ZVW7 336 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 VTCN1Q7Z7D3 282 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 LRP11Q86VZ4 500 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 HIPK1Q86Z02 1210 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 ARIH2OSQ8N7S6 290 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 OR4K5Q8NGD3 323 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 BPESC1Q9GZL8 116 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 RAB1BQ9H0U4 201 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 CHODLQ9H9P2 273 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 TMEM38BQ9NVV0 291 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 MYEF2Q9P2K5 600 aaKnown RBP11.86□□□□□ -0.51
RAB40B-204ENST00000571554 SNX13Q9Y5W8 968 aa11.86□□□□□ -0.51
RAB40B-204ENST00000571554 FBN1P35555 2871 aaKnown RBP11.86□□□□□ -0.51
RAB40B-204ENST00000571554 MALRD1Q5VYJ5 2156 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 LOC390937A0A1W2PQ73 354 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 LRP5LA4QPB2 252 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 VSTM5A8MXK1 200 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 J3KTA2 159 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 TRMUO75648 421 aaKnown RBP11.85□□□□□ -0.51
RAB40B-204ENST00000571554 SLC2A10O95528 541 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 IFNA14P01570 189 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 IGHG1P01857 330 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 FAM157BP0CG42 384 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 OR8G3PP0DMU2 310 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 APEHP13798 732 aaKnown RBP11.85□□□□□ -0.51
RAB40B-204ENST00000571554 DAOP14920 347 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 RBM34P42696 430 aaKnown RBP11.85□□□□□ -0.51
RAB40B-204ENST00000571554 ALDH3B1P43353 468 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 GALK2Q01415 458 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 FMODQ06828 376 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 LAPTM4AQ15012 233 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 MAD2L1BPQ15013 274 aaPredicted RBP11.85□□□□□ -0.51
RAB40B-204ENST00000571554 ALKBH6Q3KRA9 238 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 CHRFAM7AQ494W8 412 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 HSP90B2PQ58FF3 399 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 PIWIL3Q7Z3Z3 882 aaKnown RBP11.85□□□□□ -0.51
RAB40B-204ENST00000571554 IGFN1Q86VF2 1251 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 LRRC18Q8N456 261 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 PAQR4Q8N4S7 273 aaPredicted RBP11.85□□□□□ -0.51
RAB40B-204ENST00000571554 NOXO1Q8NFA2 376 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 IL17RDQ8NFM7 739 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 ASB10Q8WXI3 467 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 MCHR2Q969V1 340 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 MRPL24Q96A35 216 aaKnown RBP11.85□□□□□ -0.51
RAB40B-204ENST00000571554 CCDC134Q9H6E4 229 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 RNF121Q9H920 327 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 INIPQ9NRY2 104 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 MRGBPQ9NV56 204 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 MED31Q9Y3C7 131 aa11.85□□□□□ -0.51
RAB40B-204ENST00000571554 NDUFS8O00217 210 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 NME4O00746 187 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 STAMBPO95630 424 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 ZNF682O95780 498 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 COX4I1P13073 169 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 IFI30P13284 250 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 ACADSP16219 412 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 CDAP32320 146 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 MDH1P40925 334 aaKnown RBP11.84□□□□□ -0.51
RAB40B-204ENST00000571554 SLC7A2P52569 658 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 SEC24CP53992 1094 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 SELENOWP63302 87 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 LIPEQ05469 1076 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 SLC15A3Q8IY34 581 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 NSMAFQ92636 917 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 PRRC1Q96M27 445 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 SOX7Q9BT81 388 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 DUSP13Q9UII6 198 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 A4GNTQ9UNA3 340 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 SPEF1Q9Y4P9 236 aa11.84□□□□□ -0.51
RAB40B-204ENST00000571554 IGKV1D-43A0A0B4J1Z2 117 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 LOC100289279A0A1B0GTE1 492 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 CXCR6O00574 342 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 GSTA4O15217 222 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 FARS2O95363 451 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 SERPINA5P05154 406 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 ERCC1P07992 297 aaPredicted RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 MAKP20794 623 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 IL2RGP31785 369 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 DAP3P51398 398 aaKnown RBP11.83□□□□□ -0.52
RAB40B-204ENST00000571554 ZNF84P51523 738 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 ERVS71-1P61550 626 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 CD47Q08722 323 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 HIST3H3Q16695 136 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 TMEM53Q6P2H8 277 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 SLC16A14Q7RTX9 510 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 TREML1Q86YW5 311 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 CLDN22Q8N7P3 220 aa11.83□□□□□ -0.52
RAB40B-204ENST00000571554 ICA1LQ8NDH6 482 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms