RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 ASB9Q96DX5 294 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 SPDL1Q96EA4 605 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 SLC47A1Q96FL8 570 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 SH3YL1Q96HL8 342 aaPredicted RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 MUC13Q9H3R2 512 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 SPAG4Q9NPE6 437 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 GID8Q9NWU2 228 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 EMC3Q9P0I2 261 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 AASSQ9UDR5 926 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 GIMAP2Q9UG22 337 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 LEF1Q9UJU2 399 aaPredicted RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 PURGQ9UJV8 347 aaKnown RBP5.84□□□□□ -1.47
CHD3-213ENST00000571249 RNF11Q9Y3C5 154 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 ANGPTL3Q9Y5C1 460 aa5.84□□□□□ -1.47
CHD3-213ENST00000571249 PPIAL4EA0A075B759 164 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 PPIAL4CA0A0B4J2A2 164 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 PRSS51A0A1B0GVH4 220 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 TCRBV3S1A0A5B6 114 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 PPIAL4DF5H284 164 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 H0YIV9 168 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 M0R233 179 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ANGPT2O15123 496 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 SYNGR3O43761 229 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 MRPL33O75394 65 aaKnown RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 SFTPBP07988 381 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 LINGO3P0C6S8 592 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 CECR9P0C854 216 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 PPIAL4FP0DN26 164 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 PRPS2P11908 318 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 SLC6A2P23975 617 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ELK4P28324 431 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 IL12AP29459 219 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 EIF1P41567 113 aaKnown RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 ALDH3B1P43353 468 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 POLR2JP52435 117 aaKnown RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 UFM1P61960 85 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 PSG6Q00889 435 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 MS4A2Q01362 244 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 POU3F1Q03052 451 aaPredicted RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 TGFBR3Q03167 851 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ROM1Q03395 351 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 EGR3Q06889 387 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ZNF155Q12901 538 aaPredicted RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 BNIP2Q12982 314 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 DECR1Q16698 335 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 MMEL1Q495T6 779 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 CYP27C1Q4G0S4 372 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 RFTN2Q52LD8 501 aaPredicted RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 FAM219BQ5XKK7 198 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 FAM205BPQ63HN1 556 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ZNF620Q6ZNG0 422 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 LRRC74BQ6ZQY2 392 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 Q6ZSV7 163 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ARPINQ7Z6K5 226 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 SLC15A3Q8IY34 581 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 SAMD14Q8IZD0 417 aaPredicted RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 PARP8Q8N3A8 854 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 WDR20Q8TBZ3 569 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ZNF675Q8TD23 568 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 ADAMTS15Q8TE58 950 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 TEX37Q96LM6 180 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 MRI1Q9BV20 369 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 MRPL37Q9BZE1 423 aaKnown RBP5.83□□□□□ -1.48
CHD3-213ENST00000571249 C1orf109Q9NX04 203 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 SIRT5Q9NXA8 310 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 UPB1Q9UBR1 384 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 SNX6Q9UNH7 406 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 TMED5Q9Y3A6 229 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 CMAHPQ9Y471 501 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 WIPI2Q9Y4P8 454 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 KMT2AQ03164 3969 aa5.83□□□□□ -1.48
CHD3-213ENST00000571249 IGKV3D-15A0A087WSY6 115 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 PRORSD1PA6NEY8 169 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 AQP12BA6NM10 295 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 TRAPPC2LH3BP13 241 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 NME4O00746 187 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 ST8SIA5O15466 376 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 CFLARO15519 480 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 FOXH1O75593 365 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 KLK1P06870 262 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 G6PDP11413 515 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 ACADSP16219 412 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 ATP6V1C1P21283 382 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 CLDN8P56748 225 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 TUBA1BP68363 451 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 TUBA4AP68366 448 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 FLOT2Q14254 428 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 MAD2L1BPQ15013 274 aaPredicted RBP5.82□□□□□ -1.48
CHD3-213ENST00000571249 MSMPQ1L6U9 139 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 VPS26BQ4G0F5 336 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 CCDC92Q53HC0 331 aaPredicted RBP5.82□□□□□ -1.48
CHD3-213ENST00000571249 C6orf10Q5SRN2 563 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 IL23RQ5VWK5 629 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 FRG2Q64ET8 278 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 STEAP3Q658P3 488 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 GRHL2Q6ISB3 625 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 LCN8Q6JVE9 175 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 DLEU7Q6UYE1 221 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 Q6YL49 198 aa5.82□□□□□ -1.48
CHD3-213ENST00000571249 Q6ZTK2 550 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms