RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 CCL2P13500 99 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 ITGA2P17301 1181 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 GZMMP51124 257 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 CRYBA2P53672 197 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 LMO4P61968 165 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 RPS23P62266 143 aaKnown RBP12.65□□□□□ -0.38
NDE1-203ENST00000570727 MRPS11P82912 194 aaKnown RBP12.65□□□□□ -0.38
NDE1-203ENST00000570727 RUNX1T1Q06455 604 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 HIST3H3Q16695 136 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 CYP51A1Q16850 503 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 VANGL1Q8TAA9 524 aaPredicted RBP12.65□□□□□ -0.38
NDE1-203ENST00000570727 TAMM41Q96BW9 452 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 TSPAN32Q96QS1 320 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 PCDHAC1Q9H158 963 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 RABEP2Q9H5N1 569 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 NARFLQ9H6Q4 476 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 KAT8Q9H7Z6 458 aaKnown RBP12.65□□□□□ -0.38
NDE1-203ENST00000570727 MEPEQ9NQ76 525 aaPredicted RBP12.65□□□□□ -0.38
NDE1-203ENST00000570727 TREM2Q9NZC2 230 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 NDUFAF1Q9Y375 327 aa12.65□□□□□ -0.38
NDE1-203ENST00000570727 FAM157BP0CG42 384 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 ZNF250P15622 560 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 MAGEB1P43366 347 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 ALKBH6Q3KRA9 238 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 TTMPQ5BVD1 217 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 REP15Q6BDI9 236 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 DEF8Q6ZN54 512 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 RINLQ6ZS11 566 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 GLCCI1Q86VQ1 547 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 SLC30A7Q8NEW0 376 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 OR4K5Q8NGD3 323 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 STON2Q8WXE9 905 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 TMEM186Q96B77 213 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 THOC1Q96FV9 657 aaKnown RBP12.64□□□□□ -0.39
NDE1-203ENST00000570727 MPP4Q96JB8 637 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 ATP6V1G3Q96LB4 118 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 MRPL13Q9BYD1 178 aaKnown RBP12.64□□□□□ -0.39
NDE1-203ENST00000570727 SLC19A3Q9BZV2 496 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 HIF1ANQ9NWT6 349 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 TAAR3PQ9P1P4 343 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 METRNQ9UJH8 293 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 ZNF229Q9UJW7 825 aa12.64□□□□□ -0.39
NDE1-203ENST00000570727 IGLV3-9A0A075B6K5 115 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 A0A1W2PPW3 197 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 SLC22A23A1A5C7 686 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 C17orf100A8MU93 164 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 HAX1O00165 279 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 KPNA4O00629 521 aaPredicted RBP12.63□□□□□ -0.39
NDE1-203ENST00000570727 PPIHO43447 177 aaKnown RBP12.63□□□□□ -0.39
NDE1-203ENST00000570727 VENTXO95231 258 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 BCL10O95999 233 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 TFP02787 698 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 HIST1H2ABP04908 130 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 MSMBP08118 114 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 GAAP10253 952 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 SAGP10523 405 aaPredicted RBP12.63□□□□□ -0.39
NDE1-203ENST00000570727 PCMT1P22061 227 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 ERVS71-1P61550 626 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 RGS7BPQ6MZT1 257 aaPredicted RBP12.63□□□□□ -0.39
NDE1-203ENST00000570727 HIST3H2AQ7L7L0 130 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 PATL1Q86TB9 770 aaKnown RBP12.63□□□□□ -0.39
NDE1-203ENST00000570727 OR10A6Q8NH74 314 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 TSPEARQ8WU66 669 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 HIST1H2ACQ93077 130 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 MCHR2Q969V1 340 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 ZNF347Q96SE7 839 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 SEPHS2Q99611 448 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 RNF121Q9H920 327 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 LPAR2Q9HBW0 351 aa12.63□□□□□ -0.39
NDE1-203ENST00000570727 ZNF346Q9UL40 294 aaKnown RBP12.63□□□□□ -0.39
NDE1-203ENST00000570727 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 DYSFO75923 2080 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 BLOC1S5-TXNDC5H3BN57 136 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 FARS2O95363 451 aaKnown RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 F13BP05160 661 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 MMP7P09237 267 aaPredicted RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 LSP1P33241 339 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 PCGF2P35227 344 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 UCP2P55851 309 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 MYBPC1Q00872 1141 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 NFYCQ13952 458 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 TMEM53Q6P2H8 277 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 C1orf229Q6ZS94 237 aaPredicted RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 CCDC80Q76M96 950 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 SLC16A14Q7RTX9 510 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 MEX3DQ86XN8 651 aaKnown RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 NKAIN4Q8IVV8 208 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 SLC30A8Q8IWU4 369 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 ZNF519Q8TB69 540 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 SYNPRQ8TBG9 265 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 LRRC37BQ96QE4 947 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 ZNF416Q9BWM5 594 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 METTL17Q9H7H0 456 aaPredicted RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 HINT3Q9NQE9 182 aaKnown RBP12.62□□□□□ -0.39
NDE1-203ENST00000570727 TRIM33Q9UPN9 1127 aa12.62□□□□□ -0.39
NDE1-203ENST00000570727 ARHGAP32A7KAX9 2087 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 252.2 ms