RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 SLC22A24Q8N4F4 322 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 SCAIQ8N9R8 606 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 SMYD1Q8NB12 490 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 OR4M2Q8NGB6 313 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 OR4K5Q8NGD3 323 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 SYNPRQ8TBG9 265 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 SNX33Q8WV41 574 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 TMEM54Q969K7 222 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 MAELQ96JY0 434 aaKnown RBP10.27□□□□□ -0.77
CAPN3-220ENST00000569827 EPYCQ99645 322 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF385DQ9H6B1 395 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 TMEM27Q9HBJ8 222 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 CDH20Q9HBT6 801 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 HINT3Q9NQE9 182 aaKnown RBP10.27□□□□□ -0.77
CAPN3-220ENST00000569827 TMEM38BQ9NVV0 291 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 DCAF16Q9NXF7 216 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 UBAP1Q9NZ09 502 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 GLTPQ9NZD2 209 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 SELENONQ9NZV5 590 aa10.27□□□□□ -0.77
CAPN3-220ENST00000569827 TESQ9UGI8 421 aaKnown RBP10.27□□□□□ -0.77
CAPN3-220ENST00000569827 TMEM120BA0PK00 339 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 ISPDA4D126 451 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 CPSF4LA6NMK7 179 aaKnown RBP10.26□□□□□ -0.77
CAPN3-220ENST00000569827 TMPRSS2O15393 492 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 CH25HO95992 272 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 CCNOP22674 350 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 RAD52P43351 418 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 FADDQ13158 208 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 SCGB2A2Q13296 93 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 SCARB2Q14108 478 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 TNFAIP8L3Q5GJ75 292 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 PAGE3Q5JUK9 113 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 FAM91A1Q658Y4 838 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 LRFN4Q6PJG9 635 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 MSANTD1Q6ZTZ1 278 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 USP43Q70EL4 1123 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 TSPYL5Q86VY4 417 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-220ENST00000569827 RBM45Q8IUH3 476 aaKnown RBP10.26□□□□□ -0.77
CAPN3-220ENST00000569827 KIRREL3Q8IZU9 778 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 LRRC18Q8N456 261 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 SIGLECL1Q8N7X8 197 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 GOLGA6L1Q8N7Z2 621 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 OR5J2Q8NH18 312 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 VANGL1Q8TAA9 524 aaPredicted RBP10.26□□□□□ -0.77
CAPN3-220ENST00000569827 SLC35B4Q969S0 331 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 RAB39BQ96DA2 213 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF347Q96SE7 839 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 GAL3ST1Q99999 423 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 SUCNR1Q9BXA5 334 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 C7orf69Q9H7B7 122 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 THAP1Q9NVV9 213 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 THUMPD1Q9NXG2 353 aaKnown RBP10.26□□□□□ -0.77
CAPN3-220ENST00000569827 VAPAQ9P0L0 249 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 OPN4Q9UHM6 478 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 VWFP04275 2813 aa10.26□□□□□ -0.77
CAPN3-220ENST00000569827 IGLV3-9A0A075B6K5 115 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 CLDN25C9JDP6 229 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 RNF13O43567 381 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 SPRY3O43610 288 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 PRSS23O95084 383 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 OR6A2O95222 327 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 BCL10O95999 233 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 THY1P04216 161 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 QDPRP09417 244 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF250P15622 560 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 MPV17P39210 176 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 MRPS11P82912 194 aaKnown RBP10.25□□□□□ -0.77
CAPN3-220ENST00000569827 NPTX1Q15818 432 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 REEP3Q6NUK4 255 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 PIWIL3Q7Z3Z3 882 aaKnown RBP10.25□□□□□ -0.77
CAPN3-220ENST00000569827 PXKQ7Z7A4 578 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 FUNDC1Q8IVP5 155 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 BCL6BQ8N143 479 aaPredicted RBP10.25□□□□□ -0.77
CAPN3-220ENST00000569827 MREGQ8N565 214 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 SYT14Q8NB59 555 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 OR4D11Q8NGI4 311 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 OR1J1Q8NGS3 322 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 GEMIN6Q8WXD5 167 aaKnown RBP10.25□□□□□ -0.77
CAPN3-220ENST00000569827 JMJD8Q96S16 334 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 MCHR1Q99705 422 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 RAD21L1Q9H4I0 556 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 SAP30LQ9HAJ7 183 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 SLC52A3Q9NQ40 469 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 DECR2Q9NUI1 292 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 TAS2R5Q9NYW4 299 aa10.25□□□□□ -0.77
CAPN3-220ENST00000569827 DHHO43323 396 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 LYPD3O95274 346 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 FSHBP01225 129 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 PGA4P0DJD7 388 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 PGA3P0DJD8 388 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 DRD4P21917 467 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 CDAP32320 146 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 CRYBB2P43320 205 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 LIMS1P48059 325 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 ZNF74Q16587 644 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 TBC1D28Q2M2D7 210 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 TMEM53Q6P2H8 277 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 SLC16A14Q7RTX9 510 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 SNX32Q86XE0 403 aa10.24□□□□□ -0.77
CAPN3-220ENST00000569827 KRT73Q86Y46 540 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms