RNA–Protein interactions for RNA: ENST00000569338.5

BBS4-217, Transcript of Bardet-Biedl syndrome 4, human

TSL 5

Gene BBS4, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-217	ENST00000569338	PIH1D2	Q8WWB5	315 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	NR4A3	Q92570	626 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	AP3S1	Q92572	193 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	RPL3L	Q92901	407 aa	Known RBP	4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	TMEM19	Q96HH6	336 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	IGSF21	Q96ID5	467 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	TSSK3	Q96PN8	268 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	COPS8	Q99627	209 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	MAP3K3	Q99759	626 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	SLC30A2	Q9BRI3	323 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	C6orf62	Q9GZU0	229 aa	Predicted RBP	4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	TPK1	Q9H3S4	243 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	TPT1P8	Q9HAU6	139 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	ISYNA1	Q9NPH2	558 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	ZNF224	Q9NZL3	707 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	VPS29	Q9UBQ0	182 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	ATP6V1H	Q9UI12	483 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	ANGPT4	Q9Y264	503 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	VDAC3	Q9Y277	283 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	DLGAP4	Q9Y2H0	992 aa		4.27	□□□□□ -1.73
BBS4-217	ENST00000569338	CASP8AP2	Q9UKL3	1982 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SAA2-SAA4	A0A096LPE2	208 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338		A0A0G2JNG1	304 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ZSCAN5B	A6NJL1	495 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SNTN	A6NMZ2	147 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ZNF670-ZNF695	F2Z2N8	137 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GFY	I3L273	518 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	hCG_2039718	K7EN88	272 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338		M0R296	226 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ZNF197	O14709	1029 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	KMO	O15229	486 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	HCN1	O60741	890 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	TBX19	O60806	448 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CS	O75390	466 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CCNB2	O95067	398 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	LINC00271	P0C7V0	271 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CYBA	P13498	195 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CD59	P13987	128 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GNS	P15586	552 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ZNF30	P17039	623 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	PSMA1	P25786	263 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ALDH4A1	P30038	563 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ERP29	P30040	261 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CSTF2	P33240	577 aa	Known RBP eCLIP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CDKN2C	P42773	168 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GLIPR1	P48060	266 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	RORC	P51449	518 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	DCDC1	P59894	354 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ARPC4	P59998	168 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	RPS18	P62269	152 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SNRPG	P62308	76 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	MRPS15	P82914	257 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SP3	Q02447	781 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	EEF1A2	Q05639	463 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	MLLT11	Q13015	90 aa	Predicted RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	MFAP5	Q13361	173 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ASAH1	Q13510	395 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GPR50	Q13585	617 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	KIR2DS5	Q14953	304 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CDK10	Q15131	360 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	RGN	Q15493	299 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	TMEM44	Q2T9K0	475 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	TMEM41B	Q5BJD5	291 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CCNJ	Q5T5M9	372 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CPTP	Q5TA50	214 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	NKAIN2	Q5VXU1	208 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	OR4F3	Q6IEY1	312 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SPSB3	Q6PJ21	355 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	HSDL2	Q6YN16	418 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ZNF621	Q6ZSS3	439 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GDPD3	Q7L5L3	318 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	PLCZ1	Q86YW0	608 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GDPD1	Q8N9F7	314 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ASCC1	Q8N9N2	400 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	PROKR2	Q8NFJ6	384 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	OR6F1	Q8NGZ6	308 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	ANGPTL6	Q8NI99	470 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SPPL2A	Q8TCT8	520 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CAPSL	Q8WWF8	208 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GLYATL1	Q969I3	302 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	UBE2E3	Q969T4	207 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	C11orf24	Q96F05	449 aa	Predicted RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	CXorf58	Q96LI9	332 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SGK494	Q96LW2	274 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GPR137	Q96N19	417 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GUCD1	Q96NT3	240 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	HBEGF	Q99075	208 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	MGLL	Q99685	303 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	MED18	Q9BUE0	208 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	MND1	Q9BWT6	205 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	TAPBPL	Q9BX59	468 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	GON7	Q9BXV9	100 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	PRRG3	Q9BZD7	231 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	NMNAT2	Q9BZQ4	307 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	SLC22A4	Q9H015	551 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	IL26	Q9NPH9	171 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	FARSB	Q9NSD9	589 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	EXD2	Q9NVH0	621 aa		4.26	□□□□□ -1.73
BBS4-217	ENST00000569338	MRPL39	Q9NYK5	338 aa	Known RBP	4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms