RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 HS3ST1O14792 307 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 RNF13O43567 381 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 TRAF3IP2O43734 574 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 UPK3AO75631 287 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 OR7A10O76100 309 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 BCL10O95999 233 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 HPRP00739 348 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 UMPSP11172 480 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 CD53P19397 219 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 TNFRSF1BP20333 461 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 CALB2P22676 271 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 CBLP22681 906 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 ART1P52961 327 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 UBE2NP61088 152 aaKnown RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 SLC25A3Q00325 362 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 ROR2Q01974 943 aaKnown RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 TAF11Q15544 211 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 DEFB113Q30KQ7 82 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 C3orf36Q3SXR2 165 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF704Q6ZNC4 412 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 SLC35D2Q76EJ3 337 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 VTCN1Q7Z7D3 282 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 NKAIN4Q8IVV8 208 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 DEFB107AQ8IZN7 70 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 OFCC1Q8IZS5 231 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 TMEM123Q8N131 208 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 WDR31Q8NA23 367 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 IL17RDQ8NFM7 739 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 OR1K1Q8NGR3 316 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 OR6N1Q8NGY5 312 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 TMEM255BQ8WV15 326 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 ACOT11Q8WXI4 607 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 NRGNQ92686 78 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 MCUR1Q96AQ8 359 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 SLC25A44Q96H78 314 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 PYURFQ96I23 114 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 NSMCE2Q96MF7 247 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 OR2M2Q96R28 347 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 KCNJ15Q99712 375 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 JAM3Q9BX67 310 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 LIME1Q9H400 295 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 DENND2DQ9H6A0 471 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 NMNAT1Q9HAN9 279 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 GPR35Q9HC97 309 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 MEPEQ9NQ76 525 aaPredicted RBP8.04□□□□□ -1.12
CAPN3-219ENST00000569136 SEC14L4Q9UDX3 406 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 POFUT2Q9Y2G5 429 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 CADP27708 2225 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 ARID1AO14497 2285 aa8.04□□□□□ -1.12
CAPN3-219ENST00000569136 ANKRD17O75179 2603 aaKnown RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 ARPC4-TTLL3A0A0A6YYG9 625 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 A0A1W2PPR1 153 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 A0A1W2PRQ8 180 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 NPIPB13A6NJU9 1138 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 VSTM5A8MXK1 200 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF99A8MXY4 864 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 NPIPB4C9JG80 1138 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 CLOCKO15516 846 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 SMPD2O60906 423 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 NR2C1P13056 603 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 HLA-DOBP13765 273 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 CDH2P19022 906 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 CD40P25942 277 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 SLC9A3P48764 834 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 DAP3P51398 398 aaKnown RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 FOXG1P55316 489 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 ARF1P84077 181 aaKnown RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 POU3F1Q03052 451 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 PRKCDQ05655 676 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 BSPH1Q075Z2 132 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 DGCR6Q14129 220 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF672Q499Z4 452 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 C9orf135Q5VTT2 229 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 PRSS57Q6UWY2 283 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 ZNF730Q6ZMV8 503 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 MBOAT2Q6ZWT7 520 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 PIWIL3Q7Z3Z3 882 aaKnown RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 NANOGNBQ7Z5D8 188 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 LRRC75A-AS1Q8N1F1 130 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 LRRC17Q8N6Y2 441 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 OR52N5Q8NH56 324 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 AKAP1Q92667 903 aaKnown RBP eCLIP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 BPIFA2Q96DR5 249 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 TXNDC15Q96J42 360 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 NDEL1Q9GZM8 345 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 C1orf21Q9H246 121 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 MUC13Q9H3R2 512 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 CXorf56Q9H5V9 222 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 UBTD1Q9HAC8 227 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 CRLF2Q9HC73 371 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 KRCC1Q9NPI7 259 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-219ENST00000569136 FAIMQ9NVQ4 179 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 NDUFAF4Q9P032 175 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 SNX13Q9Y5W8 968 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 CSMD1Q96PZ7 3565 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 FREM1Q5H8C1 2179 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 PRR14LQ5THK1 2151 aa8.03□□□□□ -1.12
CAPN3-219ENST00000569136 F8P00451 2351 aa8.02□□□□□ -1.13
CAPN3-219ENST00000569136 LRRN3E7EW58 273 aa8.02□□□□□ -1.13
CAPN3-219ENST00000569136 C11orf98E9PRG8 122 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms