RNA–Protein interactions for RNA: ENST00000569046.1

HMGB1P6-201, Transcript of high mobility group box 1 pseudogene 6, humanhuman

BASIC

Gene HMGB1P6, Length 646 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P6-201ENST00000569046 CCDC185Q8N715 623 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 DCAF4L2Q8NA75 395 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 CCDC112Q8NEF3 446 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 FDCSPQ8NFU4 85 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR2AP1Q8NGE2 309 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR4D9Q8NGE8 314 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR5M9Q8NGP3 310 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLC37A2Q8TED4 501 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 GATAD1Q8WUU5 269 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 DNAJA4Q8WW22 397 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 SLCO2A1Q92959 643 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 ADIPOR1Q96A54 375 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 OMA1Q96E52 524 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 SH3YL1Q96HL8 342 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 HSFY1Q96LI6 401 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 LURAP1Q96LR2 239 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 TGM7Q96PF1 710 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 PYGO2Q9BRQ0 406 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZYG11BQ9C0D3 744 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 ING2Q9H160 280 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 ANKRA2Q9H9E1 313 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 IL1RL2Q9HB29 575 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 NEK6Q9HC98 313 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 UFSP2Q9NUQ7 469 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 MED17Q9NVC6 651 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 GPR83Q9NYM4 423 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 C19orf25Q9UFG5 118 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 LNPEPQ9UIQ6 1025 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 MAN1B1Q9UKM7 699 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 FZR1Q9UM11 496 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 GSTK1Q9Y2Q3 226 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 CSAG2Q9Y5P2 127 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 DCHS2Q6V1P9 2916 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 AKAP9Q99996 3911 aa2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 PRRC2CQ9Y520 2896 aaKnown RBP2.73□□□□□ -1.97
HMGB1P6-201ENST00000569046 LRRK2Q5S007 2527 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 SNTNA6NMZ2 147 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 KRTAP9-6A8MVA2 160 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 EPM2AB3EWF7 344 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 C19orf84I3L1E1 186 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 CASKO14936 926 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 CETN3O15182 167 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 NBR2O15453 112 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 KDELR3O43731 214 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 TIMM8AO60220 97 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 KIAA0513O60268 411 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 STX10O60499 249 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ALOX12BO75342 701 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 UPK3AO75631 287 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 KRT33AO76009 404 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ANGPTL1O95841 491 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 IGSF6O95976 241 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 NPPAP01160 153 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 PLEKP08567 350 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 DBTP11182 482 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 UQCRBP14927 111 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 UGT1A4P22310 534 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 TUBG1P23258 451 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 BMI1P35226 326 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ANP32AP39687 249 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 FEN1P39748 380 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 NDUFA8P51970 172 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 HADHBP55084 474 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 GSCP56915 257 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 RPL27P61353 136 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 PPP1CAP62136 330 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 EWSR1Q01844 656 aaKnown RBP eCLIP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 RAD51Q06609 339 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF74Q16587 644 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 PTPN20Q4JDL3 420 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZCWPW2Q504Y3 356 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 FGD3Q5JSP0 725 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 SPANXN4Q5MJ08 99 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 SPANXN2Q5MJ10 180 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 CTSL3PQ5NE16 218 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ZNF730Q6ZMV8 503 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 C19orf35Q6ZS72 473 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 EIF3MQ7L2H7 374 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 FCRLAQ7L513 359 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 HSD11B1LQ7Z5J1 315 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 SETD3Q86TU7 594 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 C17orf82Q86X59 251 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 CATSPERDQ86XM0 798 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 KATNAL2Q8IYT4 538 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 DND1Q8IYX4 353 aaKnown RBP2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 ADGRG4Q8IZF6 3080 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 LINC00518Q8N0U6 118 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 CLEC4FQ8N1N0 589 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAM89BQ8N5H3 189 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 SYT14Q8NB59 555 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 SPATA4Q8NEY3 305 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 OR10G6Q8NH81 332 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 KCNG3Q8TAE7 436 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 C8orf46Q8TAG6 207 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 FAM222BQ8WU58 562 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 NRGNQ92686 78 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 UPRTQ96BW1 309 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 DOCK10Q96BY6 2186 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 PELI1Q96FA3 418 aa2.72□□□□□ -1.97
HMGB1P6-201ENST00000569046 CELF6Q96J87 481 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms