RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 PLP2Q04941 152 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 HNF4GQ14541 408 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 FXNQ16595 210 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 ZNF362Q5T0B9 420 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 PPP1R1CQ8WVI7 109 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CMSS1Q9BQ75 279 aaKnown RBP11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CHRDQ9H2X0 955 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 ZMAT5Q9UDW3 170 aaKnown RBP11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 TAF1P21675 1872 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 SHROOM3Q8TF72 1996 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 C17orf113A0A1B0GUU1 675 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 TMEM235A6NFC5 223 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 FCMRO60667 390 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 OPN1LWP04000 364 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CD14P08571 375 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 PTHLHP12272 177 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 NAGAP17050 411 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CD53P19397 219 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 SLC48A1Q6P1K1 146 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 PRR18Q8N4B5 295 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 DEFB119Q8N690 84 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 POC1BQ8TC44 478 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 WFDC5Q8TCV5 224 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 DDIT4LQ96D03 193 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 GIMAP5Q96F15 307 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 ZNF681Q96N22 645 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 DEFB126Q9BYW3 111 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 C12orf10Q9HB07 376 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 ZNF354AO60765 605 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 ITGB8P26012 769 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 POU3F1Q03052 451 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 C19orf57Q0VDD7 668 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 PMPCAQ10713 525 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 ERV3-1Q14264 604 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 KLHDC8BQ8IXV7 354 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 DUSP18Q8NEJ0 188 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 BPIFCQ8NFQ6 507 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 SMIM19Q96E16 107 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CAPNS2Q96L46 248 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 SLC46A2Q9BY10 475 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 SLC6A17Q9H1V8 727 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 PLEKHA3Q9HB20 300 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 MRPS28Q9Y2Q9 187 aaKnown RBP11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CDC14CA4D256 554 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 IGLV3-25P01717 112 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 HBE1P02100 147 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CHRM4P08173 479 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 RRASP10301 218 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 REEP5Q00765 189 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 IHHQ14623 411 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CDK5R1Q15078 307 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 MPEG1Q2M385 716 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 RAET1LQ5VY80 246 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 C12orf73Q69YU5 71 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 CLEC9AQ6UXN8 241 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 GLDNQ6ZMI3 551 aaPredicted RBP11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 TMEM217Q8N7C4 229 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 OR4C16Q8NGL9 310 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 RSC1A1Q92681 617 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 FGGYQ96C11 551 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 UBQLN4Q9NRR5 601 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 TMEM100Q9NV29 134 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 HCFC1R1Q9NWW0 138 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 V9GYH0 126 aa11.41□□□□□ -0.58
CSPG4P13-202ENST00000567704 FBLP22087 321 aaKnown RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 DLX2Q07687 328 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 RIN1Q13671 783 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 SERTAD2Q14140 314 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 HNRNPA1L2Q32P51 320 aaKnown RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 KCNIP4Q6PIL6 250 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 KCNG3Q8TAE7 436 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 PLEK2Q9NYT0 353 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 PLEKHB1Q9UF11 243 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 TCRBV16S1A1N1A0A5B0 115 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 TP53I11O14683 189 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 DBHP09172 617 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 POU3F3P20264 500 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 P2RX1P51575 399 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 MVDP53602 400 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 IFITM2Q01629 132 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 TLE4Q04727 773 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 ZNF239Q16600 458 aaKnown RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 FAM69BQ5VUD6 431 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 LINC00346Q8IVM7 164 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 FAM160A2Q8N612 972 aaPredicted RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 CLSTN3Q9BQT9 956 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 RAB22AQ9UL26 194 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 HS3ST2Q9Y278 367 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 PRAMEF27A3QJZ7 478 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 TMPRSS11DO60235 418 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 GPR137BO60478 399 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 HIST1H1CP16403 213 aaKnown RBP11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 RFX2P48378 723 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 HHEXQ03014 270 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 KIR2DS3Q14952 304 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 ELOCQ15369 112 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 SFRP5Q5T4F7 317 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 PRAMEF9Q5VWM5 478 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 ABHD17CQ6PCB6 329 aa11.4□□□□□ -0.58
CSPG4P13-202ENST00000567704 GKN2Q86XP6 184 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms