RNA–Protein interactions for RNA: ENST00000566240.1

CNOT1-209, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 4

Gene CNOT1, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-209ENST00000566240 LYARQ9NX58 379 aaKnown RBP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 LSM7Q9UK45 103 aaKnown RBP3.62□□□□□ -1.83
CNOT1-209ENST00000566240 ABCA9Q8IUA7 1624 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 MSH6P52701 1360 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 CHD4Q14839 1912 aa3.62□□□□□ -1.83
CNOT1-209ENST00000566240 ANKRD50Q9ULJ7 1429 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 DUOX2Q9NRD8 1548 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 IGKV3D-20A0A0C4DH25 116 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 A0A0G2JLM5 398 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 C12orf71A8MTZ7 269 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 SUPT3HB4E1H0 165 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 ERVV-1B6SEH8 477 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 SPECC1L-ADORA2AF8WAN1 911 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 MMP23AO75900 390 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CLIC3O95833 236 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 MYL2P10916 166 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CCNB1P14635 433 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 FOXN2P32314 431 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 MAGEA1P43355 309 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 GPR6P46095 362 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-209ENST00000566240 RGRP47804 291 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 UQCRFS1P47985 274 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 UGT2B15P54855 530 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 YWHAGP61981 247 aaKnown RBP eCLIP3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CYTH1Q15438 398 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 NSDHLQ15738 373 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CASC10Q5T4H9 136 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CNIH2Q6PI25 160 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CERS6Q6ZMG9 384 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 RFLNAQ6ZTI6 216 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 LYG1Q8N1E2 194 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 PNKDQ8N490 385 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 EID2Q8N6I1 236 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 PQLC3Q8N755 202 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 FAM184AQ8NB25 1140 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 VN1R2Q8NFZ6 395 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 RHEBL1Q8TAI7 183 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 FANK1Q8TC84 345 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CXorf40AQ8TE69 158 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 UCN3Q969E3 161 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 FCRL1Q96LA6 429 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 MAGEB18Q96M61 343 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 ROGDIQ9GZN7 287 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 GPATCH2LQ9NWQ4 482 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 PDP1Q9P0J1 537 aaPredicted RBP3.61□□□□□ -1.83
CNOT1-209ENST00000566240 CLCF1Q9UBD9 225 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 TBC1D24Q9ULP9 559 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 IQGAP3Q86VI3 1631 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 ABCC5O15440 1437 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 ERBINQ96RT1 1412 aa3.61□□□□□ -1.83
CNOT1-209ENST00000566240 ARHGEF12Q9NZN5 1544 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 FAM135AQ9P2D6 1515 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 ERCC6L2Q5T890 1561 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 TRAV25A0A0B4J276 109 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 A0A1B0GTQ1 180 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 GOLGA8TH3BQL2 631 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 TEX46H3BTG2 121 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SIRPB1O00241 398 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 CHST1O43916 411 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SRSF10O75494 262 aaKnown RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 EIF3GO75821 320 aaKnown RBP eCLIP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SUPT7LO94864 414 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 KLK2P20151 261 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 GSTM3P21266 225 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 ZBTB25P24278 435 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 STOMP27105 288 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 RBMXP38159 391 aaKnown RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 PEX19P40855 299 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 NAMPTP43490 491 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 RPS5P46782 204 aaKnown RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 CX3CR1P49238 355 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 CSNK1EP49674 416 aaKnown RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SSR4P51571 173 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SUB1P53999 127 aaKnown RBP eCLIP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 STX17P56962 302 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 PRPS1P60891 318 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 TIMM10P62072 90 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SELENBP1Q13228 472 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 NRF1Q16656 503 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SOHLH1Q5JUK2 328 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 PPM1LQ5SGD2 360 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 TWF2Q6IBS0 349 aaKnown RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 ZNF544Q6NX49 715 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 TMEM135Q86UB9 458 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 MICU2Q8IYU8 434 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 LINC00612Q8N6U2 182 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 FRAT1Q92837 279 aaPredicted RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 DNTTIP1Q9H147 329 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 NEUROG2Q9H2A3 272 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SRMSQ9H3Y6 488 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 UGT1A10Q9HAW8 530 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SAMSN1Q9NSI8 373 aaKnown RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 XCL2Q9UBD3 114 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 UXTQ9UBK9 157 aaPredicted RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 ZNF256Q9Y2P7 627 aaPredicted RBP3.6□□□□□ -1.83
CNOT1-209ENST00000566240 NEUROG3Q9Y4Z2 214 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 MMP24Q9Y5R2 645 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SLC25A15Q9Y619 301 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 CDH10Q9Y6N8 788 aa3.6□□□□□ -1.83
CNOT1-209ENST00000566240 SYNRGQ9UMZ2 1314 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms