RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 RPL13AP3Q6NVV1 102 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 THSD4Q6ZMP0 1018 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 DPY19L2P2Q6ZN68 376 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 ZNF620Q6ZNG0 422 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 CDC20BQ86Y33 519 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 FOXB1Q99853 325 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 TMEM204Q9BSN7 226 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 DGCR6LQ9BY27 220 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 NPAP1Q9NZP6 1156 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 GRHPRQ9UBQ7 328 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 DNAJB9Q9UBS3 223 aa18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 ZNF346Q9UL40 294 aaKnown RBP18.44■□□□□ 0.54
SHCBP1-205ENST00000566016 DHHO43323 396 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 AHCYL1O43865 530 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 ENTPD5O75356 428 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 SDHAP31040 664 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 CCNIQ14094 377 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 NCMAPQ5T1S8 102 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 C10orf128Q5T292 105 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 FAM169BQ8N8A8 192 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 HDAC2Q92769 488 aaKnown RBP18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 PLPPR2Q96GM1 343 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 OR52D1Q9H346 318 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 ARMC1Q9NVT9 282 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 POFUT2Q9Y2G5 429 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 ADAM18Q9Y3Q7 739 aa18.43■□□□□ 0.54
SHCBP1-205ENST00000566016 MYO9AB2RTY4 2548 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 A0A1W2PPR1 153 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 GNGT2O14610 69 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 DEAF1O75398 565 aaPredicted RBP18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 TXNDC12O95881 172 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 QDPRP09417 244 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 ACVR1BP36896 505 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 ERFP50548 548 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 UBE2NP61088 152 aaKnown RBP18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 ERVK-25P63136 954 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 PPP1R8Q12972 351 aaKnown RBP18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 RFX4Q33E94 735 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 KLHL17Q6TDP4 642 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 TMEM108Q6UXF1 575 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 ADCK1Q86TW2 530 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 CLDN22Q8N7P3 220 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 SYT14Q8NB59 555 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 AQP11Q8NBQ7 271 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 MCHR2Q969V1 340 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 ZNF570Q96NI8 536 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 HS3ST6Q96QI5 342 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 PLEKHF2Q9H8W4 249 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 MGAT4BQ9UQ53 548 aa18.42■□□□□ 0.54
SHCBP1-205ENST00000566016 ARPC3O15145 178 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 GSTM3P21266 225 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 SLC6A6P31641 620 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 RPS6KA3P51812 740 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 CD47Q08722 323 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 C3orf36Q3SXR2 165 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 THEM4Q5T1C6 240 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 CD300LDQ6UXZ3 194 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 ZNF813Q6ZN06 617 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 RASSF6Q6ZTQ3 369 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 OR10G2Q8NGC3 310 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 IL20Q9NYY1 176 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 CDH10Q9Y6N8 788 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 CREBBPQ92793 2442 aa18.41■□□□□ 0.54
SHCBP1-205ENST00000566016 A0A096LPE4 126 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 A0A1W2PPZ6 126 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 A0A1W2PR80 420 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 XKRYO14609 159 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 MGRN1O60291 552 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 GASTP01350 101 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 PTAFRP25105 342 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 ZNF84P51523 738 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 BSPH1Q075Z2 132 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 MESTQ5EB52 335 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 ALKBH2Q6NS38 261 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 GIPC3Q8TF64 312 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 Q96M85 177 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 TMEM38BQ9NVV0 291 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 CRNNQ9UBG3 495 aaPredicted RBP18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 RNF115Q9Y4L5 304 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 DSCAMO60469 2012 aa18.4■□□□□ 0.54
SHCBP1-205ENST00000566016 DPRXA6NFQ7 191 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 IMPA2O14732 288 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 E2F6O75461 281 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 CD3EP07766 207 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 FCGR1AP12314 374 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 B4GALT1P15291 398 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 IST1P53990 364 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 ACTR3P61158 418 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 KRR1Q13601 381 aaKnown RBP18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 NRBF2Q96F24 287 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 RADILQ96JH8 1075 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 RBP7Q96R05 134 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 DENND2DQ9H6A0 471 aaPredicted RBP18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 IL20RAQ9UHF4 553 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 AP4S1Q9Y587 144 aa18.39■□□□□ 0.54
SHCBP1-205ENST00000566016 TEX13CA0A0J9YWL9 993 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 PRSS37A4D1T9 235 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 IDH3BO43837 385 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 SEC14L2O76054 403 aa18.39■□□□□ 0.53
SHCBP1-205ENST00000566016 IGKV3-15P01624 115 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms