RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 TRMUO75648 421 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 IGHMP01871 453 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 PGA4P0DJD7 388 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 PGA3P0DJD8 388 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 ACADSP16219 412 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 PPP1R8Q12972 351 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 TAF11Q15544 211 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 HIST3H3Q16695 136 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 DEPDC4Q8N2C3 294 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 KBTBD8Q8NFY9 601 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 RSRC1Q96IZ7 334 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 MRPL13Q9BYD1 178 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 CISD1Q9NZ45 108 aaKnown RBP12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 HIVEP1P15822 2718 aa12.08□□□□□ -0.48
HERPUD1-210ENST00000565966 CENPBD1B2RD01 187 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 SHISA9B4DS77 424 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 EBAG9O00559 213 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 SMPD2O60906 423 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 TMCC2O75069 709 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 NDUFB2O95178 105 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 CST1P01037 141 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 IGHG1P01857 330 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 HOXB6P17509 224 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 FPR3P25089 353 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 GSSP48637 474 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 ERFP50548 548 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 FXYD6P3P58550 94 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 RPL27P61353 136 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 ERVK-25P63136 954 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 TOP3AQ13472 1001 aaPredicted RBP12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 C1orf94Q6P1W5 598 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 PGBD2Q6P3X8 592 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 LRFN4Q6PJG9 635 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 HDDC2Q7Z4H3 204 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 CCDC36Q8IYA8 594 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 LRRC75A-AS1Q8N1F1 130 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 PAPD5Q8NDF8 572 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 NOXO1Q8NFA2 376 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 OR9Q2Q8NGE9 314 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 GNPDA2Q8TDQ7 276 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 TMEM171Q8WVE6 324 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 IGFBPL1Q8WX77 278 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 HDAC2Q92769 488 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 NEUROG1Q92886 237 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 SLCO4A1Q96BD0 722 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 REEP1Q9H902 201 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 MOV10Q9HCE1 1003 aaKnown RBP12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 POFUT2Q9Y2G5 429 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 RTTNQ86VV8 2226 aa12.07□□□□□ -0.48
HERPUD1-210ENST00000565966 VPS13CQ709C8 3753 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 DHHO43323 396 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 FKBP6O75344 327 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 SEC14L2O76054 403 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 CCNB2O95067 398 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 CD14P08571 375 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 QDPRP09417 244 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 DANCRP0C864 163 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 RPL4P36578 427 aaKnown RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ACVR1BP36896 505 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 IFNGR2P38484 337 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 CLRN1P58418 232 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 MYBPC1Q00872 1141 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ZNF770Q6IQ21 691 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 SLC22A25Q6T423 547 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 THSD4Q6ZMP0 1018 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ZNF627Q7L945 461 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 LINC00471Q8N535 108 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 SYT14Q8NB59 555 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ZNF519Q8TB69 540 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 SMAP2Q8WU79 429 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 UTP4Q969X6 686 aaKnown RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 KCNK17Q96T54 332 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 KATNB1Q9BVA0 655 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 CXorf56Q9H5V9 222 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 STX18Q9P2W9 335 aaKnown RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 CRNNQ9UBG3 495 aaPredicted RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 POU2F3Q9UKI9 436 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 LAMP3Q9UQV4 416 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ADAM18Q9Y3Q7 739 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 SAMHD1Q9Y3Z3 626 aaKnown RBP12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 U3KQV3 271 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ARFGEF3Q5TH69 2177 aa12.06□□□□□ -0.48
HERPUD1-210ENST00000565966 ARHGEF9O43307 516 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 GASTP01350 101 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 CBR1P16152 277 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 ZNF133P52736 654 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 CDH11P55287 796 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 TUBA1BP68363 451 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 TUBA4AP68366 448 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 ADAM8P78325 824 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 NKX6-1P78426 367 aaPredicted RBP12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 TSPAN31Q12999 210 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 MICAQ29983 383 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 C3orf36Q3SXR2 165 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 C1orf146Q5VVC0 180 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 SHEQ5VZ18 495 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 FAM205BPQ63HN1 556 aa12.05□□□□□ -0.48
HERPUD1-210ENST00000565966 SMARCD3Q6STE5 483 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms