RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 ABCC12Q96J65 1359 aa3.22□□□□□ -1.89
LINC00560-201ENST00000564593 LAMA4Q16363 1823 aa3.22□□□□□ -1.89
LINC00560-201ENST00000564593 ELP1O95163 1332 aa3.22□□□□□ -1.89
LINC00560-201ENST00000564593 TNS3Q68CZ2 1445 aa3.22□□□□□ -1.89
LINC00560-201ENST00000564593 GTF3C1Q12789 2109 aa3.22□□□□□ -1.89
LINC00560-201ENST00000564593 RBMY1BA6NDE4 496 aaKnown RBP3.21□□□□□ -1.89
LINC00560-201ENST00000564593 RBMY1EA6NEQ0 496 aaKnown RBP3.21□□□□□ -1.89
LINC00560-201ENST00000564593 UBXN8O00124 270 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 NPIPB7O75200 414 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 MMP1P03956 469 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 RBMY1DP0C7P1 496 aaKnown RBP3.21□□□□□ -1.89
LINC00560-201ENST00000564593 RBMY1A1P0DJD3 496 aaKnown RBP3.21□□□□□ -1.89
LINC00560-201ENST00000564593 TBPP20226 339 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 TPMTP51580 245 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 ATP5IP56385 69 aaPredicted RBP3.21□□□□□ -1.89
LINC00560-201ENST00000564593 GNMTQ14749 295 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 DGUOKQ16854 277 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 PRAMEF5Q5TYX0 476 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 GPR157Q5UAW9 335 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 PRAMEF6Q5VXH4 476 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 ZNF620Q6ZNG0 422 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 RFLNAQ6ZTI6 216 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 ZNF546Q86UE3 836 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 PAQR7Q86WK9 346 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 TPRX1Q8N7U7 411 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 OR1L6Q8NGR2 347 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 PYROXD1Q8WU10 500 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 PLEKHA8Q96JA3 519 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 C12orf42Q96LP6 360 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 TCHPQ9BT92 498 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 CHRDL1Q9BU40 450 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 ROGDIQ9GZN7 287 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 GBA3Q9H227 469 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 ASB8Q9H765 288 aa3.21□□□□□ -1.89
LINC00560-201ENST00000564593 TJP1Q07157 1748 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 ABCA3Q99758 1704 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 IGKV6D-41A0A0C4DH26 115 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 A0A0U1RQS6 177 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 CCDC182A6NF36 153 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 H0Y9J4 135 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 KLF8O95600 359 aaPredicted RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 GAPDHP04406 335 aaKnown RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 GIPP09681 153 aaPredicted RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 SLC2A3P11169 496 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 EIF2S2P20042 333 aaKnown RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 CMA1P23946 247 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 TPM4P67936 248 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 PDIA2Q13087 525 aaKnown RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 GK3PQ14409 553 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 C1orf94Q6P1W5 598 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 TAS2R42Q7RTR8 314 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 RALGPS2Q86X27 583 aaPredicted RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 EGFL6Q8IUX8 553 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 SLC22A9Q8IVM8 553 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 MFSD6LQ8IWD5 586 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 SUMF2Q8NBJ7 301 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 SDR9C7Q8NEX9 313 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 OR9K2Q8NGE7 335 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 TPD52L3Q96J77 140 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 RASL11BQ9BPW5 248 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 LLPHQ9BRT6 129 aaKnown RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 PELOQ9BRX2 385 aaKnown RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 PKIBQ9C010 78 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 ZSCAN16Q9H4T2 348 aaPredicted RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 IL26Q9NPH9 171 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 ABCB10Q9NRK6 738 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 DDX19AQ9NUU7 478 aaKnown RBP3.21□□□□□ -1.9
LINC00560-201ENST00000564593 ETNK2Q9NVF9 386 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 QPCTLQ9NXS2 382 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 SLC7A8Q9UHI5 535 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 CFAP45Q9UL16 551 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 PEX16Q9Y5Y5 336 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 ADCY9O60503 1353 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 CPDO75976 1380 aa3.21□□□□□ -1.9
LINC00560-201ENST00000564593 PLCH1Q4KWH8 1693 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 COL18A1P39060 1754 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 PCDH11XQ9BZA7 1347 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 ARAP2Q8WZ64 1704 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 C1orf167Q5SNV9 1468 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 PXDNQ92626 1479 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 CARMIL3Q8ND23 1372 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 JCADQ9P266 1359 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 PPIAL4EA0A075B759 164 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 A0A1W2PPE3 182 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 GJE1A6NN92 205 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 DYNC1I1O14576 645 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 FAM189A1O60320 539 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 OR7A10O76100 309 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 CHTF8P0CG12 524 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 PPIAL4FP0DN26 164 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 ICAM2P13598 275 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 SLC2A5P22732 501 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 CTRLP40313 264 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 DAZ2Q13117 558 aaKnown RBP3.2□□□□□ -1.9
LINC00560-201ENST00000564593 ZNF77Q15935 545 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 SSX2Q16385 188 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 LRRC74BQ6ZQY2 392 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 AKR7LQ8NHP1 331 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 ELSPBP1Q96BH3 223 aa3.2□□□□□ -1.9
LINC00560-201ENST00000564593 FCRL1Q96LA6 429 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms