RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 MBD3L4A6NDZ8 208 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 MBD3L3A6NE82 208 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 MBD3L5A6NJ08 208 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 OR6C65A6NJZ3 312 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 SNTNA6NMZ2 147 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 CLDN14O95500 239 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 IL2RAP01589 272 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 CDKN2AP42771 156 aaKnown RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 ISL1P61371 349 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 EFNB1P98172 346 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 CRMP1Q14194 572 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 MAD2L1BPQ15013 274 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 MESTQ5EB52 335 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 ZNF362Q5T0B9 420 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 MEDAGQ5VYS4 303 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 CARD17Q5XLA6 110 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 CXXC5Q7LFL8 322 aaKnown RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 CCDC71Q8IV32 467 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 CPOQ8IVL8 374 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 ENTHD1Q8IYW4 607 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 NPEPL1Q8NDH3 523 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 OR6N1Q8NGY5 312 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 MBD3L2Q8NHZ7 208 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 ZFP3Q96NJ6 502 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 NMNAT3Q96T66 252 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 ALG12Q9BV10 488 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 COQ3Q9NZJ6 369 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 ING1Q9UK53 422 aaPredicted RBP15.02■□□□□ -0
CMTM3-208ENST00000564247 GPR52Q9Y2T5 361 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 EMC9Q9Y3B6 208 aa15.02■□□□□ -0
CMTM3-208ENST00000564247 SS18L1O75177 396 aaPredicted RBP15.01□□□□□ -0.01
CMTM3-208ENST00000564247 CRHP06850 196 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 GRNP28799 593 aaKnown RBP15.01□□□□□ -0.01
CMTM3-208ENST00000564247 TIMP3P35625 211 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 CSNK1A1P48729 337 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 LGALS3BPQ08380 585 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 CD47Q08722 323 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 CDSNQ15517 529 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 SLC25A30Q5SVS4 291 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 THEM4Q5T1C6 240 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 RTL6Q6ICC9 239 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 PLBD1Q6P4A8 553 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 DNM1P34Q6PK57 102 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 ZNF100Q8IYN0 542 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 RPRMLQ8N4K4 120 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 C9orf106Q8NAJ2 232 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 SYT14Q8NB59 555 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 CYB561A3Q8NBI2 242 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 HDAC2Q92769 488 aaKnown RBP15.01□□□□□ -0.01
CMTM3-208ENST00000564247 RFKQ969G6 155 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 LRR1Q96L50 414 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 OR2M2Q96R28 347 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 B3GAT2Q9NPZ5 323 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 VSX1Q9NZR4 365 aaPredicted RBP15.01□□□□□ -0.01
CMTM3-208ENST00000564247 FAM215AQ9Y5M1 114 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 ARHGAP21Q5T5U3 1957 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 DOCK7Q96N67 2140 aa15.01□□□□□ -0.01
CMTM3-208ENST00000564247 TEX15Q9BXT5 2789 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 SLC22A23A1A5C7 686 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 OR6C68A6NDL8 312 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 KDM4EB2RXH2 506 aaPredicted RBP15□□□□□ -0.01
CMTM3-208ENST00000564247 M0R129 80 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 KRT33AO76009 404 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 CRABP1P29762 137 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 SELENOPP49908 381 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 TEKQ02763 1124 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 CDK5R2Q13319 367 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 OCLNQ16625 522 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 NXNL2Q5VZ03 156 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 FAM214BQ7L5A3 538 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 OR2T4Q8NH00 348 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 CA5BP1Q8WTZ4 195 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 RND1Q92730 232 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 KCNK17Q96T54 332 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 DDOQ99489 341 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 TTYH2Q9BSA4 534 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 MRPL13Q9BYD1 178 aaKnown RBP15□□□□□ -0.01
CMTM3-208ENST00000564247 SRA1Q9HD15 236 aaKnown RBP15□□□□□ -0.01
CMTM3-208ENST00000564247 HINT3Q9NQE9 182 aaKnown RBP15□□□□□ -0.01
CMTM3-208ENST00000564247 RPRD1BQ9NQG5 326 aaKnown RBP15□□□□□ -0.01
CMTM3-208ENST00000564247 ASB6Q9NWX5 421 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 LRCH1Q9Y2L9 728 aa15□□□□□ -0.01
CMTM3-208ENST00000564247 NOTCH2Q04721 2471 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 SH3D21A4FU49 640 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 FAM183AA6NL82 134 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 H7C1C5 153 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 ZNF432O94892 652 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 PGA4P0DJD7 388 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 PGA3P0DJD8 388 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 TMIGD3P0DMS9 266 aaPredicted RBP14.99□□□□□ -0.01
CMTM3-208ENST00000564247 GLI4P10075 376 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 AGTR1P30556 359 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 SLC25A1P53007 311 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 LCN6P62502 163 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 CSNK2BP67870 215 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 RUNX1T1Q06455 604 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 PMPCAQ10713 525 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 KLHL12Q53G59 568 aa14.99□□□□□ -0.01
CMTM3-208ENST00000564247 NUFIP2Q7Z417 695 aaKnown RBP14.99□□□□□ -0.01
CMTM3-208ENST00000564247 GID4Q8IVV7 300 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms