RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 SLC25A18Q9H1K4 315 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 CHST11Q9NPF2 352 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 LOXL2Q9Y4K0 774 aa17.17■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF593O00488 134 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-203ENST00000563226 SEC14L5O43304 696 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 POU3F1Q03052 451 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-203ENST00000563226 TLE3Q04726 772 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 FMODQ06828 376 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 ASAH1Q13510 395 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 HSD17B12Q53GQ0 312 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 KCTD20Q7Z5Y7 419 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 SCAIQ8N9R8 606 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 OR4M1Q8NGD0 313 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 TXNDC15Q96J42 360 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 GFI1Q99684 422 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 C11orf54Q9H0W9 315 aaPredicted RBP17.16■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF160Q9HCG1 818 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 MED29Q9NX70 200 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 ADAM30Q9UKF2 790 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 A0A0G2JMP0 313 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 A0A0X1KG70 313 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF879B4DU55 563 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 PLA2G10O15496 165 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 FLRT2O43155 660 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 STK17BO94768 372 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 MPZL1O95297 269 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 WNT11O96014 354 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 FOLR3P41439 243 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 MYBPHQ13203 477 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 EXT1Q16394 746 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 FADS6Q8N9I5 356 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 OR4M2Q8NGB6 313 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 CYSLTR2Q9NS75 346 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 SACM1LQ9NTJ5 587 aa17.16■□□□□ 0.34
SMPD3-203ENST00000563226 NOTOA8MTQ0 251 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 NPIPA5E9PKD4 350 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 SNPHO15079 494 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 SPARCP09486 303 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 EPXP11678 715 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 SNRPBP14678 240 aaKnown RBP17.15■□□□□ 0.34
SMPD3-203ENST00000563226 EGR3Q06889 387 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 MFSD13AQ14CX5 517 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 YIF1BQ5BJH7 314 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 LRRN1Q6UXK5 716 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 LRRC28Q86X40 367 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-203ENST00000563226 UBE2J2Q8N2K1 259 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 ZNF248Q8NDW4 579 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 M1APQ8TC57 530 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 C5orf34Q96MH7 638 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 DERL3Q96Q80 235 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 UBL7Q96S82 380 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-203ENST00000563226 MNTQ99583 582 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 POTEKPQ9BYX7 375 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 CDCP1Q9H5V8 836 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 NPIPA1Q9UND3 350 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 COA3Q9Y2R0 106 aaPredicted RBP17.15■□□□□ 0.34
SMPD3-203ENST00000563226 TMEM14AQ9Y6G1 99 aa17.15■□□□□ 0.34
SMPD3-203ENST00000563226 IGKV1D-43A0A0B4J1Z2 117 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 CD97P48960 835 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 RIN1Q13671 783 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 DCAF12Q5T6F0 453 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 TRILQ7L0X0 811 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 PRSS35Q8N3Z0 413 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 IL17RDQ8NFM7 739 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 OR4K17Q8NGC6 315 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 OR2G2Q8NGZ5 317 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 OR5AK2Q8NH90 309 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 NSMAFQ92636 917 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 HPS1Q92902 700 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 ZCCHC4Q9H5U6 513 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 ANKRD10Q9NXR5 420 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 ALKBH4Q9NXW9 302 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 NSG1A0A0A6YYJ2 146 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 A0A1W2PNR3 127 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 H3BSH0 61 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 TP53I11O14683 189 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 CCL3P10147 92 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 SRMP19623 302 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 PTBP1P26599 531 aaKnown RBP eCLIP17.14■□□□□ 0.33
SMPD3-203ENST00000563226 HSF1Q00613 529 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 TIPARPQ7Z3E1 657 aaKnown RBP17.14■□□□□ 0.33
SMPD3-203ENST00000563226 OR10AC1Q8NH08 325 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 B3GAT1Q9P2W7 334 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 CLEC4AQ9UMR7 237 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 R4GN57 208 aa17.14■□□□□ 0.33
SMPD3-203ENST00000563226 OR4C45A6NMZ5 311 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 HLA-DQB1P01920 261 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 NPR2P20594 1047 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 ADAM8P78325 824 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 ODF4Q2M2E3 257 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 PLA2G2CQ5R387 149 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 C3orf33Q6P1S2 294 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 RDH10Q8IZV5 341 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 PCSK5Q92824 1860 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 OR8B4Q96RC9 309 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 KCNK17Q96T54 332 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 EMC6Q9BV81 110 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 ELOVL3Q9HB03 270 aa17.13■□□□□ 0.33
SMPD3-203ENST00000563226 ANKRD61A6NGH8 418 aa17.12■□□□□ 0.33
SMPD3-203ENST00000563226 G3V3Y1 287 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms