RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 TBRG1Q3YBR2 411 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ZBED5Q49AG3 693 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 NCMAPQ5T1S8 102 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 C9orf135Q5VTT2 229 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 HMBOX1Q6NT76 420 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 LRFN4Q6PJG9 635 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 TMEM200AQ86VY9 491 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 GPR137CQ8N3F9 429 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 PAPD5Q8NDF8 572 aaKnown RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 OR13C2Q8NGS9 318 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ASB10Q8WXI3 467 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 BCL2L2Q92843 193 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 MUCL1Q96DR8 90 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 GPX7Q96SL4 187 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CHID1Q9BWS9 393 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 MRPL18Q9H0U6 180 aaKnown RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 TXNIPQ9H3M7 391 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 OBP2BQ9NPH6 170 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 SLC17A5Q9NRA2 495 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 GLTPQ9NZD2 209 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 PDZD2O15018 2839 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 SPG11Q96JI7 2443 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ARPC4-TTLL3A0A0A6YYG9 625 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 DPRXA6NFQ7 191 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 MCIDASD6RGH6 385 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 M0R3G1 203 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 KRT33AO76009 404 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 STAMBPO95630 424 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 FPR3P25089 353 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 GSSP48637 474 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CSNK1A1P48729 337 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 DAP3P51398 398 aaKnown RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 NR1H2P55055 460 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CTXN1P60606 82 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 RPL27P61353 136 aaKnown RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CBX1P83916 185 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ARF1P84077 181 aaKnown RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 GK3PQ14409 553 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 HIKESHIQ53FT3 197 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CARD17Q5XLA6 110 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 OR2T5Q6IEZ7 315 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 PGBD2Q6P3X8 592 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ANKRD16Q6P6B7 361 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 FAM122BQ7Z309 247 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 LINC00471Q8N535 108 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CELF2-AS1Q8N7Q2 184 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 OR6N1Q8NGY5 312 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 OR2T29Q8NH02 315 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 OR52N5Q8NH56 324 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF519Q8TB69 540 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF566Q969W8 418 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 UTP4Q969X6 686 aaKnown RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 SLCO4A1Q96BD0 722 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 ANAPC16Q96DE5 110 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 PIK3IP1Q96FE7 263 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 PLPPR2Q96GM1 343 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 TSPAN32Q96QS1 320 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 NGBQ9NPG2 151 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 KRCC1Q9NPI7 259 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 NRIP3Q9NQ35 241 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 CCM2LQ9NUG4 571 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 VNN3Q9NY84 501 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 STX18Q9P2W9 335 aaKnown RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 AMDHD2Q9Y303 409 aa5.41□□□□□ -1.54
CNOT1-204ENST00000563130 HRNRQ86YZ3 2850 aaPredicted RBP5.41□□□□□ -1.54
CNOT1-204ENST00000563130 A0A1W2PR80 420 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 TNFRSF11BO00300 401 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 EBAG9O00559 213 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 OR10H3O60404 316 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 EIF4EBP3O60516 100 aaPredicted RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 TRMUO75648 421 aaKnown RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 NDUFB2O95178 105 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 IGHG1P01857 330 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 CD14P08571 375 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 ACADSP16219 412 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 CDH2P19022 906 aaPredicted RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 PAX7P23759 505 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 TSPAN31Q12999 210 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 C10orf128Q5T292 105 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 ADAM5Q6NVV9 412 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 HDDC2Q7Z4H3 204 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 FAM169BQ8N8A8 192 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 NOXO1Q8NFA2 376 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 SVIPQ8NHG7 77 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 NRGNQ92686 78 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 HDAC2Q92769 488 aaKnown RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 MCHR2Q969V1 340 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 DUS3LQ96G46 650 aaKnown RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 RSRC1Q96IZ7 334 aaKnown RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 KATNB1Q9BVA0 655 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 ULBP2Q9BZM5 246 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 LIME1Q9H400 295 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 SMURF2Q9HAU4 748 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF224Q9NZL3 707 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 CRNNQ9UBG3 495 aaPredicted RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 ZNF346Q9UL40 294 aaKnown RBP5.4□□□□□ -1.54
CNOT1-204ENST00000563130 TMCC3Q9ULS5 477 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 AURKCQ9UQB9 309 aa5.4□□□□□ -1.54
CNOT1-204ENST00000563130 NAV2Q8IVL1 2488 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms