RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TAS2R3Q9NYW6 316 aa12.69□□□□□ -0.38
VPS9D1-202ENST00000561976 TRBV5-7A0A0A0MS05 114 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 RAD1O60671 282 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 SDHAP31040 664 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 CCKBRP32239 447 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 CSF2RBP32927 897 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 ARHGDIBP52566 201 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 SCAND1P57086 179 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 RAB11BQ15907 218 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 C2orf76Q3KRA6 126 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 ARHGAP40Q5TG30 622 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 ELP2Q6IA86 826 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 BEST3Q8N1M1 668 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 C12orf45Q8N5I9 185 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 BAHD1Q8TBE0 780 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 ST8SIA2Q92186 375 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 VSTM2LQ96N03 204 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 GPX7Q96SL4 187 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 WDR76Q9H967 626 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 IL23AQ9NPF7 189 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 UPB1Q9UBR1 384 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 IGKV1D-42A0A075B6H8 117 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 PCP4L1A6NKN8 68 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 SRPX2O60687 465 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 AKR7A3O95154 331 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 GPANK1O95872 356 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 ITGA5P08648 1049 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 UBBP0CG47 229 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 UBCP0CG48 685 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 RPS27AP62979 156 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 UBA52P62987 128 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 GRM7Q14831 915 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 DEFB110Q30KQ9 67 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 OTPQ5XKR4 325 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 FAM122BQ7Z309 247 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 PATE1Q8WXA2 126 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 HOXB13Q92826 284 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 FAM3DQ96BQ1 224 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 LRRC46Q96FV0 321 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 LMF1Q96S06 567 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF416Q9BWM5 594 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 PBX4Q9BYU1 374 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 TMEM185BQ9H7F4 350 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 PCDHB16Q9NRJ7 776 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF230Q9UIE0 474 aaPredicted RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 MRTO4Q9UKD2 239 aaKnown RBP12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 PLCL2Q9UPR0 1127 aa12.68□□□□□ -0.38
VPS9D1-202ENST00000561976 HEATR5AQ86XA9 2040 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 TMEM82A0PJX8 343 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 C2orf74A8MZ97 194 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 NPIPB9F8W1W9 429 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 OR4E1P0C645 316 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 CENPAP49450 140 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF74Q16587 644 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 LRRC69Q6ZNQ3 347 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF627Q7L945 461 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 GABRG1Q8N1C3 465 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 PRSS35Q8N3Z0 413 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 EXD3Q8N9H8 876 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 STEAP2Q8NFT2 490 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 WDR92Q96MX6 357 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 SLC6A15Q9H2J7 730 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 HRASLS2Q9NWW9 162 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 HIF3AQ9Y2N7 669 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 H3BUI4 141 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 PRKNO60260 465 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 RAB3DO95716 219 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 PMS2P2O95744 297 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 WNT11O96014 354 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 MGMTP16455 207 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 CSRP1P21291 193 aaKnown RBP12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 ACTBP60709 375 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 ACTG1P63261 375 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 RASGEF1BQ0VAM2 473 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 ZNF169Q14929 603 aaPredicted RBP12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 CLEC1AQ8NC01 280 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 RSC1A1Q92681 617 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 SLC19A3Q9BZV2 496 aa12.67□□□□□ -0.38
VPS9D1-202ENST00000561976 TRAV14DV4A0A0A6YYC5 116 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 KANTRA0A1W2PQU2 76 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 OR2W5A6NFC9 320 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 M0QYG6 137 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 RENP00797 406 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 HLA-DQA2P01906 255 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 IFI6P09912 130 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 HPGDP15428 266 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 AGTR1P30556 359 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 NFATC4Q14934 902 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 LRRC37A5PQ49AS3 106 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 BIVMQ86UB2 503 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 BCORP1Q8N888 145 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 DNAJA3Q96EY1 480 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 DCBLD2Q96PD2 775 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 INTS14Q96SY0 518 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 PDCD10Q9BUL8 212 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 POTEKPQ9BYX7 375 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 SLC6A5Q9Y345 797 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 EML5Q05BV3 1969 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 LOC100289279A0A1B0GTE1 492 aa12.66□□□□□ -0.38
VPS9D1-202ENST00000561976 DNASE2O00115 360 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms