RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 HS3ST5Q8IZT8 346 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 OR4A15Q8NGL6 344 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 MCFD2Q8NI22 146 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 CNIH3Q8TBE1 160 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 PMM1Q92871 262 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 SLC35A5Q9BS91 424 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 INPP5KQ9BT40 448 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 MED18Q9BUE0 208 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 TAPBPLQ9BX59 468 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 GSX2Q9BZM3 304 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 CCDC90BQ9GZT6 254 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 DCSTAMPQ9H295 470 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 PIF1Q9H611 641 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 A4GALTQ9NPC4 353 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 ACER3Q9NUN7 267 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 EXD2Q9NVH0 621 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 MRPS18AQ9NVS2 196 aaKnown RBP6.1□□□□□ -1.43
SPG11-224ENST00000561268 KLHL28Q9NXS3 571 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 VNN3Q9NY84 501 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 ERVK-18Q9QC07 812 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 MGAT4BQ9UQ53 548 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 ANGPT4Q9Y264 503 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 GPR52Q9Y2T5 361 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 WDR45Q9Y484 360 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 PMF1-BGLAPU3KQ54 211 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 NF1P21359 2839 aa6.1□□□□□ -1.43
SPG11-224ENST00000561268 CSPG4Q6UVK1 2322 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 IQCMA0A1B0GVH7 501 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 SNTNA6NMZ2 147 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 ZNF716A6NP11 495 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 TMEM229AB2RXF0 380 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 CCRL2O00421 344 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 MAGEB3O15480 346 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 XPNPEP2O43895 674 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 GMFGO60234 142 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 ATP6V1G1O75348 118 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 SYNGR4O95473 234 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 PMS2P2O95744 297 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 CSTAP01040 98 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 APOA1P02647 267 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 IFNW1P05000 195 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 SCG5P05408 212 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 OR12D1P0DN82 309 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 BMP4P12644 408 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 CD99P14209 185 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 PGCP20142 388 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 PRKACGP22612 351 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 PSMB9P28065 219 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 RRM2P31350 389 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 RPS5P46782 204 aaKnown RBP6.09□□□□□ -1.43
SPG11-224ENST00000561268 CAPZA2P47755 286 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 ANXA11P50995 505 aaKnown RBP6.09□□□□□ -1.43
SPG11-224ENST00000561268 CRYBA2P53672 197 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 UGT2B15P54855 530 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 CTBP2P56545 445 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 H3F3AP84243 136 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 POU4F3Q15319 338 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 LINC01559Q495D7 138 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 GTDC1Q4AE62 458 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 SPANXN2Q5MJ10 180 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 SHEQ5VZ18 495 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 TNFAIP8L2Q6P589 184 aaPredicted RBP6.09□□□□□ -1.43
SPG11-224ENST00000561268 DNAJC14Q6Y2X3 702 aaPredicted RBP6.09□□□□□ -1.43
SPG11-224ENST00000561268 Q6ZT83 130 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 OLIG3Q7RTU3 272 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 C16orf62Q7Z3J2 963 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 NUFIP2Q7Z417 695 aaKnown RBP6.09□□□□□ -1.43
SPG11-224ENST00000561268 GRINAQ7Z429 371 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 CCDC190Q86UF4 302 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 RNF130Q86XS8 419 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 LYSMD2Q8IV50 215 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 C10orf111Q8N326 155 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 WFDC11Q8NEX6 87 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 PROKR2Q8NFJ6 384 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 OR10G2Q8NGC3 310 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 NDNFQ8TB73 568 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 TMEM234Q8WY98 164 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 PROX1Q92786 737 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 OSTF1Q92882 214 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 POM121Q96HA1 1249 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 SPATA5L1Q9BVQ7 753 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 POTEKPQ9BYX7 375 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 ANKRD19PQ9H560 264 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 SLC25A19Q9HC21 320 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 ZNF701Q9NV72 531 aaPredicted RBP6.09□□□□□ -1.43
SPG11-224ENST00000561268 KLHL9Q9P2J3 617 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 MALT1Q9UDY8 824 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 CHRNA9Q9UGM1 479 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 CLEC4AQ9UMR7 237 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 LIPT1Q9Y234 373 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 IFT52Q9Y366 437 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 V9GYQ6 96 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 ZANQ9Y493 2812 aa6.09□□□□□ -1.43
SPG11-224ENST00000561268 MALRD1Q5VYJ5 2156 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 A0A1W2PNR3 127 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 HTR3EA5X5Y0 456 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 ZNF814B7Z6K7 855 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 J3QRK9 145 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 M0R082 166 aa6.08□□□□□ -1.44
SPG11-224ENST00000561268 CCNB2O95067 398 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms