RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 GCH1P30793 250 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 PRKAR1BP31321 381 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 NME5P56597 212 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 NRN1LQ496H8 165 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 ARMCX4Q5H9R4 360 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 PAQR4Q8N4S7 273 aaPredicted RBP15.72■□□□□ 0.11
TPM1-226ENST00000560959 CPEB3Q8NE35 698 aaKnown RBP15.72■□□□□ 0.11
TPM1-226ENST00000560959 DEFB108BQ8NET1 73 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 OR6X1Q8NH79 312 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 TRIM44Q96DX7 344 aaPredicted RBP15.72■□□□□ 0.11
TPM1-226ENST00000560959 SORT1Q99523 831 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 GLTPQ9NZD2 209 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 ZNF69Q9UC07 566 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 LEF1Q9UJU2 399 aaPredicted RBP15.72■□□□□ 0.11
TPM1-226ENST00000560959 MMP24Q9Y5R2 645 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 CACNG2Q9Y698 323 aa15.72■□□□□ 0.11
TPM1-226ENST00000560959 MGRN1O60291 552 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 ADH4P08319 380 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 DRD4P21917 467 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 ZFP36P26651 326 aaKnown RBP15.71■□□□□ 0.11
TPM1-226ENST00000560959 HTR2AP28223 471 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 SLC1A6P48664 564 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 ZNF81P51508 661 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 TBC1D28Q2M2D7 210 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 TMEM53Q6P2H8 277 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 WDR88Q6ZMY6 472 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 MIER2Q8N344 545 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 BBS10Q8TAM1 723 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 CCL17Q92583 94 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 C1QTNF5Q9BXJ0 243 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 A4GALTQ9NPC4 353 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 TMEM38BQ9NVV0 291 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 PURGQ9UJV8 347 aaKnown RBP15.71■□□□□ 0.11
TPM1-226ENST00000560959 ZNF281Q9Y2X9 895 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 AUP1Q9Y679 476 aa15.71■□□□□ 0.11
TPM1-226ENST00000560959 UBOX5O94941 541 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 ANP32DO95626 131 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 MT-ATP6P00846 226 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 BMP2P12643 396 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 LIPAP38571 399 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 ERVS71-1P61550 626 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 ZNF154Q13106 437 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 TSTQ16762 297 aaKnown RBP15.7■□□□□ 0.1
TPM1-226ENST00000560959 SLC36A2Q495M3 483 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 MSANTD1Q6ZTZ1 278 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 DUX5Q96PT3 197 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 SELENONQ9NZV5 590 aa15.7■□□□□ 0.1
TPM1-226ENST00000560959 A0A1B0GUS0 222 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 IGHV1-46P01743 117 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 CCL2P13500 99 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 MAKP20794 623 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 AHCYP23526 432 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 MMP15P51511 669 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 BIDP55957 195 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 PLP2Q04941 152 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 FADDQ13158 208 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 RGNQ15493 299 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 KLF17Q5JT82 389 aaPredicted RBP15.69■□□□□ 0.1
TPM1-226ENST00000560959 LRFN4Q6PJG9 635 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 DHRS4L2Q6PKH6 230 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 C1orf174Q8IYL3 243 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 PKNOX2Q96KN3 472 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 ZNF48Q96MX3 618 aaPredicted RBP15.69■□□□□ 0.1
TPM1-226ENST00000560959 MOGAT1Q96PD6 335 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 SH3GL3Q99963 347 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 TMEM43Q9BTV4 400 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 RSPO3Q9BXY4 272 aaPredicted RBP15.69■□□□□ 0.1
TPM1-226ENST00000560959 EGLN1Q9GZT9 426 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 RMND5AQ9H871 391 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 RNF121Q9H920 327 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 TMEM27Q9HBJ8 222 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 MMP26Q9NRE1 261 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 CYSLTR2Q9NS75 346 aa15.69■□□□□ 0.1
TPM1-226ENST00000560959 TESQ9UGI8 421 aaKnown RBP15.69■□□□□ 0.1
TPM1-226ENST00000560959 A0A0B4J2E0 115 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 IQCMA0A1B0GVH7 501 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 A0A1B0GX12 115 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 WDR91A4D1P6 747 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 TM9SF1O15321 606 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 DHHO43323 396 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 ZNF500O60304 480 aaPredicted RBP15.68■□□□□ 0.1
TPM1-226ENST00000560959 SLC22A3O75751 556 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 IGHMP01871 453 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 ZNF12P17014 697 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 MTNR1AP48039 350 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 SLC9A3R2Q15599 337 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 SWT1Q5T5J6 900 aaKnown RBP15.68■□□□□ 0.1
TPM1-226ENST00000560959 LEG1Q6P5S2 330 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 C9orf139Q6ZV77 190 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 BCL6BQ8N143 479 aaPredicted RBP15.68■□□□□ 0.1
TPM1-226ENST00000560959 OR5J2Q8NH18 312 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 ZNF566Q969W8 418 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 SLC25A44Q96H78 314 aaPredicted RBP15.68■□□□□ 0.1
TPM1-226ENST00000560959 ITCHQ96J02 903 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 DIRC2Q96SL1 478 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 RAD21L1Q9H4I0 556 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 EVA1AQ9H8M9 152 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 UBAP1Q9NZ09 502 aa15.68■□□□□ 0.1
TPM1-226ENST00000560959 CGGBP1Q9UFW8 167 aaPredicted RBP15.68■□□□□ 0.1
TPM1-226ENST00000560959 INSIG2Q9Y5U4 225 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms