RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 WDR74Q6RFH5 385 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 GPR26Q8NDV2 337 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 NINQ8N4C6 2090 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 FDXRP22570 491 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 SLC35A1P78382 337 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR8B4Q96RC9 309 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 NXT1Q9UKK6 140 aaKnown RBP12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 MAGI3Q5TCQ9 1506 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF93P35789 620 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZXDBP98169 803 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF468Q5VIY5 522 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 PODNL1Q6PEZ8 512 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ANKRD53Q8N9V6 530 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ACVR1CQ8NER5 493 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 OR5A2Q8NGI9 324 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ATRNO75882 1429 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 AKR1C3P42330 323 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 CLDN17P56750 224 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 SFXN4Q6P4A7 337 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 TIPARPQ7Z3E1 657 aaKnown RBP12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF573Q86YE8 665 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 FZD8Q9H461 694 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF629Q9UEG4 869 aaPredicted RBP12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 HSBP1O75506 76 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 RRASP10301 218 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 ACKR1Q16570 336 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 UBALD1Q8TB05 177 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 VRTNQ9H8Y1 702 aa12.84□□□□□ -0.35
CSPG4P12-202ENST00000559989 M0R143 59 aa12.83□□□□□ -0.35
CSPG4P12-202ENST00000559989 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.35
CSPG4P12-202ENST00000559989 SPINT3P49223 89 aa12.83□□□□□ -0.35
CSPG4P12-202ENST00000559989 ZNF787Q6DD87 383 aa12.83□□□□□ -0.35
CSPG4P12-202ENST00000559989 LAX1Q8IWV1 398 aa12.83□□□□□ -0.35
CSPG4P12-202ENST00000559989 CHD1O14646 1710 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 PIAS2O75928 621 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 EMC10Q5UCC4 262 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR10P1Q8NGE3 313 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 AAMDCQ9H7C9 122 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SRPK3Q9UPE1 567 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 BAZ2AQ9UIF9 1905 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 NME4O00746 187 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 PPOXP50336 477 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 CST6Q15828 149 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR2J1Q9GZK6 312 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SIAEQ9HAT2 523 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR1A1Q9P1Q5 309 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 MARCH4Q9P2E8 410 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 NSG1A0A0A6YYJ2 146 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 GCSHP23434 173 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 GPM6AP51674 278 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 CNN1P51911 297 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 HERVK_113P61574 105 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 MLF2Q15773 248 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SLC35G1Q2M3R5 365 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 FFAR4Q5NUL3 377 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SIAH3Q8IW03 269 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 UTP4Q969X6 686 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 DUSP23Q9BVJ7 150 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF835Q9Y2P0 537 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 CEP170BQ9Y4F5 1589 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 GALR3O60755 368 aaPredicted RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 OR5AL1P0C617 328 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 EDDM3AQ14507 147 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 PRR27Q6MZM9 219 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 TFAP2EQ6VUC0 442 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 GABARAPL1Q9H0R8 117 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 IFT22Q9H7X7 185 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 HSFX1Q9UBD0 423 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SPEF2Q9C093 1822 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 COCHO43405 550 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SCG5P05408 212 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 TGFBR1P36897 503 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 IGDCC3Q8IVU1 814 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 TMIGD2Q96BF3 282 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 RPUSD4Q96CM3 377 aaKnown RBP12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SIGLEC10Q96LC7 697 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 SMIM7Q9BQ49 75 aa12.83□□□□□ -0.36
CSPG4P12-202ENST00000559989 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GLCEO94923 617 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GCGP01275 180 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CYC1P08574 325 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CR2P20023 1033 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GATMP50440 423 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 ERVPABLB-1P60509 514 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 ARRDC3Q96B67 414 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 PPP1R3CQ9UQK1 317 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 MAOBP27338 520 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 GPR12P47775 334 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CDC34P49427 236 aaPredicted RBP12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 ZNF485Q8NCK3 441 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 PECRQ9BY49 303 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 CPEB1Q9BZB8 566 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 TRAV20A0A0B4J274 112 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 HS3ST1O14792 307 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 SH3BP2P78314 561 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 MEX3DQ86XN8 651 aaKnown RBP12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 RHOXF1Q8NHV9 184 aa12.82□□□□□ -0.36
CSPG4P12-202ENST00000559989 FAM3CQ92520 227 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms