RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 MAGOHP61326 146 aaKnown RBP11.19□□□□□ -0.62
TPM1-220ENST00000559556 RUNX1T1Q06455 604 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 NKPD1Q17RQ9 610 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 C1orf229Q6ZS94 237 aaPredicted RBP11.19□□□□□ -0.62
TPM1-220ENST00000559556 USP43Q70EL4 1123 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 PAQR4Q8N4S7 273 aaPredicted RBP11.19□□□□□ -0.62
TPM1-220ENST00000559556 SLC30A7Q8NEW0 376 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 ZNF418Q8TF45 676 aaPredicted RBP11.19□□□□□ -0.62
TPM1-220ENST00000559556 ZNF566Q969W8 418 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 SLC25A44Q96H78 314 aaPredicted RBP11.19□□□□□ -0.62
TPM1-220ENST00000559556 C7orf26Q96N11 449 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 MCHR1Q99705 422 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 ARHGDIGQ99819 225 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 CPPED1Q9BRF8 314 aaPredicted RBP11.19□□□□□ -0.62
TPM1-220ENST00000559556 SLCO1B3Q9NPD5 702 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 G6PC2Q9NQR9 355 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 ARGLU1Q9NWB6 273 aaPredicted RBP11.19□□□□□ -0.62
TPM1-220ENST00000559556 NKIRAS2Q9NYR9 191 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 TAS2R5Q9NYW4 299 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 TAAR3PQ9P1P4 343 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 GPR160Q9UJ42 338 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 ANGPT4Q9Y264 503 aa11.19□□□□□ -0.62
TPM1-220ENST00000559556 M0R3H8 397 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 OR6A2O95222 327 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 LYPD3O95274 346 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 FARS2O95363 451 aaKnown RBP11.18□□□□□ -0.62
TPM1-220ENST00000559556 CLPTM1O96005 669 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 MAGEB1P43366 347 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 ARFIP2P53365 341 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 HILS1P60008 231 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 ACTG1P63261 375 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 MYBPC1Q00872 1141 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 NPTX1Q15818 432 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 ZNF74Q16587 644 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 PCGF3Q3KNV8 242 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 ALKBH6Q3KRA9 238 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 NRN1LQ496H8 165 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 TMEM53Q6P2H8 277 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 LRFN4Q6PJG9 635 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 PTOV1Q86YD1 416 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 TEX29Q8N6K0 151 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 SMYD1Q8NB12 490 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 SYNPRQ8TBG9 265 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 FAM216AQ8WUB2 273 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 SNX33Q8WV41 574 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 ZMYND19Q96E35 227 aaPredicted RBP11.18□□□□□ -0.62
TPM1-220ENST00000559556 SH3GL3Q99963 347 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 EBF4Q9BQW3 602 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 ZNF426Q9BUY5 554 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 ZNF665Q9H7R5 613 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 NANSQ9NR45 359 aa11.18□□□□□ -0.62
TPM1-220ENST00000559556 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.18□□□□□ -0.62
TPM1-220ENST00000559556 DHHO43323 396 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 RNF13O43567 381 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 DEAF1O75398 565 aaPredicted RBP11.17□□□□□ -0.62
TPM1-220ENST00000559556 THY1P04216 161 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 FAM157BP0CG42 384 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 ANPEPP15144 967 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 EPHA1P21709 976 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 CRYBB2P43320 205 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 IDH3AP50213 366 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 ATP4BP51164 291 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 SELENOVP59797 346 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 CCL8P80075 99 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 RBBP4Q09028 425 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 MELKQ14680 651 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 HIST3H3Q16695 136 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 DUSP7Q16829 419 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 ENTPD8Q5MY95 495 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 TMEM154Q6P9G4 183 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 DLEU7Q6UYE1 221 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 TSPYL5Q86VY4 417 aaPredicted RBP11.17□□□□□ -0.62
TPM1-220ENST00000559556 C11orf65Q8NCR3 313 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 GPR32P1Q8NGA4 272 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 OR4K5Q8NGD3 323 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 OR6T1Q8NGN1 323 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 ZNF519Q8TB69 540 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 ADAMTS16Q8TE57 1224 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 RAB39BQ96DA2 213 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 TSPAN32Q96QS1 320 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 CCDC28BQ9BUN5 200 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 BCL2L14Q9BZR8 327 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 SLC19A3Q9BZV2 496 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 PCDHAC1Q9H158 963 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 CDH20Q9HBT6 801 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 HINT3Q9NQE9 182 aaKnown RBP11.17□□□□□ -0.62
TPM1-220ENST00000559556 SLCO1C1Q9NYB5 712 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 ZNF229Q9UJW7 825 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 PCDHB10Q9UN67 800 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
TPM1-220ENST00000559556 LOC105371242A0A075B767 164 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 TMEM89A2RUT3 159 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 TRAPPC13A5PLN9 417 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 CPSF4LA6NMK7 179 aaKnown RBP11.16□□□□□ -0.62
TPM1-220ENST00000559556 SPRY1O43609 319 aaPredicted RBP11.16□□□□□ -0.62
TPM1-220ENST00000559556 CH25HO95992 272 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 AVPP01185 164 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 PTHP01270 115 aa11.16□□□□□ -0.62
TPM1-220ENST00000559556 IGHV2-5P01817 119 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms