RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 LRRC37BQ96QE4 947 aa9.49□□□□□ -0.89
SPG11-216ENST00000559347 ZNF347Q96SE7 839 aa9.49□□□□□ -0.89
SPG11-216ENST00000559347 MRPL13Q9BYD1 178 aaKnown RBP9.49□□□□□ -0.89
SPG11-216ENST00000559347 ARL8BQ9NVJ2 186 aa9.49□□□□□ -0.89
SPG11-216ENST00000559347 TMEM38BQ9NVV0 291 aa9.49□□□□□ -0.89
SPG11-216ENST00000559347 ADA2Q9NZK5 511 aa9.49□□□□□ -0.89
SPG11-216ENST00000559347 TAGLN3Q9UI15 199 aa9.49□□□□□ -0.89
SPG11-216ENST00000559347 SAMD4AQ9UPU9 718 aaKnown RBP9.49□□□□□ -0.89
SPG11-216ENST00000559347 ENPP4Q9Y6X5 453 aa9.49□□□□□ -0.89
SPG11-216ENST00000559347 YLPM1P49750 1951 aaKnown RBP9.49□□□□□ -0.89
SPG11-216ENST00000559347 FN1P02751 2386 aaKnown RBP9.49□□□□□ -0.89
SPG11-216ENST00000559347 TRAV27A0A087WT01 109 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 A0A087WUU8 490 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 RNF223E7ERA6 249 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 DYNC1I1O14576 645 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 TRMUO75648 421 aaKnown RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 UBL3O95164 117 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 LY6G6DO95868 133 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 QDPRP09417 244 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 SAGP10523 405 aaPredicted RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 HSD17B1P14061 328 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 ACADSP16219 412 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 GIPRP48546 466 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 PTDSS1P48651 473 aaKnown RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 ZNF133P52736 654 aaPredicted RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 VLDLRP98155 873 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 MYBPC1Q00872 1141 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 PRKCDQ05655 676 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 CHRNB3Q05901 458 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 SNTB2Q13425 540 aaKnown RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 FHL1Q13642 323 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 ADIPOQQ15848 244 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 MST1LQ2TV78 715 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 C10orf128Q5T292 105 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 ARMC4Q5T2S8 1044 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 GLYATQ6IB77 296 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 LRFN4Q6PJG9 635 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 VHLLQ6RSH7 139 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 MBOAT2Q6ZWT7 520 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 Q71RC1 249 aaPredicted RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 MEX3DQ86XN8 651 aaKnown RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 SKA3Q8IX90 412 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 RNF113BQ8IZP6 322 aaKnown RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 ANKS4BQ8N8V4 417 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 MCHR2Q969V1 340 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 POM121Q96HA1 1249 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 C7orf34Q96L11 122 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 TXNIPQ9H3M7 391 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 ANKRD19PQ9H560 264 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 DENND2DQ9H6A0 471 aaPredicted RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 ZNF442Q9H7R0 627 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 DCAF13Q9NV06 445 aaKnown RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 STX18Q9P2W9 335 aaKnown RBP9.48□□□□□ -0.89
SPG11-216ENST00000559347 MAGEL2Q9UJ55 1249 aa9.48□□□□□ -0.89
SPG11-216ENST00000559347 EFCAB9A8MZ26 197 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 CDC42EP2O14613 210 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 ARPC2O15144 300 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SSX4O60224 188 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 ENTPD5O75356 428 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SLC2A10O95528 541 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 RAB36O95755 333 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SEMG1P04279 462 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 OR4A8P0C604 315 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 OR8G3PP0DMU2 310 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 BMP4P12644 408 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 HOXB4P17483 251 aaPredicted RBP9.47□□□□□ -0.89
SPG11-216ENST00000559347 TCN1P20061 433 aaPredicted RBP9.47□□□□□ -0.89
SPG11-216ENST00000559347 SERPINF1P36955 418 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 GPR4P46093 362 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SLC9A3P48764 834 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 ZNF84P51523 738 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SNRPD2P62316 118 aaKnown RBP9.47□□□□□ -0.89
SPG11-216ENST00000559347 RAB1AP62820 205 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 FMODQ06828 376 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 PIGFQ07326 219 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 KRTAP1-1Q07627 177 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 TOP3AQ13472 1001 aaPredicted RBP9.47□□□□□ -0.89
SPG11-216ENST00000559347 LAPTM4AQ15012 233 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 RAB35Q15286 201 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 TAF11Q15544 211 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 EFNB3Q15768 340 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 ANKDD1AQ495B1 522 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 NRN1LQ496H8 165 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 KRT80Q6KB66 452 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 TBPL2Q6SJ96 375 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 ZNF730Q6ZMV8 503 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 IGFN1Q86VF2 1251 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 CYP4Z1Q86W10 505 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 ZNF584Q8IVC4 421 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 ZNF525Q8N782 197 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 LRRC75AQ8NAA5 344 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SYT14Q8NB59 555 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 MAPK1IP1LQ8NDC0 245 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 IL17RDQ8NFM7 739 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 OR4K5Q8NGD3 323 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 OR13C2Q8NGS9 318 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 FGFBP3Q8TAT2 258 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 SLC7A13Q8TCU3 470 aa9.47□□□□□ -0.89
SPG11-216ENST00000559347 HDAC2Q92769 488 aaKnown RBP9.47□□□□□ -0.89
SPG11-216ENST00000559347 NMD3Q96D46 503 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms