RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 IGHV1-18A0A0C4DH31 117 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 TCRBV3S1A0A5B6 114 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 NPIPB13A6NJU9 1138 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 NPIPB4C9JG80 1138 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 DHHO43323 396 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 HLA-HP01893 362 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 PATE4P0C8F1 98 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 RAP2AP10114 183 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 CD53P19397 219 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 CD40P25942 277 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 HOXC12P31275 282 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 GSSP48637 474 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 MESTQ5EB52 335 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 OR2T5Q6IEZ7 315 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 ZNF770Q6IQ21 691 aaPredicted RBP16.31■□□□□ 0.2
CASC4-209ENST00000559222 TMEM179BQ7Z7N9 219 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 OR2T29Q8NH02 315 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 MAGEE2Q8TD90 523 aaPredicted RBP16.31■□□□□ 0.2
CASC4-209ENST00000559222 UTP4Q969X6 686 aaKnown RBP16.31■□□□□ 0.2
CASC4-209ENST00000559222 NGBQ9NPG2 151 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 POFUT2Q9Y2G5 429 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 UGT2A1Q9Y4X1 527 aa16.31■□□□□ 0.2
CASC4-209ENST00000559222 HEATR1Q9H583 2144 aaKnown RBP16.31■□□□□ 0.2
CASC4-209ENST00000559222 STAMBPO95630 424 aa16.3■□□□□ 0.2
CASC4-209ENST00000559222 RPL4P36578 427 aaKnown RBP16.3■□□□□ 0.2
CASC4-209ENST00000559222 HMGA2P52926 109 aa16.3■□□□□ 0.2
CASC4-209ENST00000559222 UBE2NP61088 152 aaKnown RBP16.3■□□□□ 0.2
CASC4-209ENST00000559222 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
CASC4-209ENST00000559222 MDP1Q86V88 176 aa16.3■□□□□ 0.2
CASC4-209ENST00000559222 FANK1Q8TC84 345 aa16.3■□□□□ 0.2
CASC4-209ENST00000559222 TMEM38BQ9NVV0 291 aa16.3■□□□□ 0.2
CASC4-209ENST00000559222 TMCC3Q9ULS5 477 aa16.3■□□□□ 0.2
CASC4-209ENST00000559222 TEX13CA0A0J9YWL9 993 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 ATP6V1G2-DDX39BF2Z307 99 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 HS3ST1O14792 307 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 ATP5HO75947 161 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 NDUFB2O95178 105 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 PPP1R3DO95685 299 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 WNT11O96014 354 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 RAF1P04049 648 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 CD14P08571 375 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 IGFBP1P08833 259 aaPredicted RBP16.29■□□□□ 0.2
CASC4-209ENST00000559222 FPR3P25089 353 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 CDAP32320 146 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 CAPZA2P47755 286 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 ZNF133P52736 654 aaPredicted RBP16.29■□□□□ 0.2
CASC4-209ENST00000559222 PIGFQ07326 219 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 CD47Q08722 323 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 ANKDD1AQ495B1 522 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 ZNF672Q499Z4 452 aaPredicted RBP16.29■□□□□ 0.2
CASC4-209ENST00000559222 C1orf94Q6P1W5 598 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 SLC25A47Q6Q0C1 308 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 ASRGL1Q7L266 308 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 SKA3Q8IX90 412 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 ARIH2OSQ8N7S6 290 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 NSMAFQ92636 917 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 SAMD8Q96LT4 415 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 GPX7Q96SL4 187 aaPredicted RBP16.29■□□□□ 0.2
CASC4-209ENST00000559222 SH3GL3Q99963 347 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 OR52D1Q9H346 318 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 EGLN3Q9H6Z9 239 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 B3GNT2Q9NY97 397 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 CRNNQ9UBG3 495 aaPredicted RBP16.29■□□□□ 0.2
CASC4-209ENST00000559222 SAMHD1Q9Y3Z3 626 aaKnown RBP16.29■□□□□ 0.2
CASC4-209ENST00000559222 OTOGQ6ZRI0 2925 aa16.29■□□□□ 0.2
CASC4-209ENST00000559222 FKBP6O75344 327 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 KRT36O76013 467 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 CCNB2O95067 398 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 GASTP01350 101 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 CECR9P0C854 216 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 IDH3GP51553 393 aaPredicted RBP16.28■□□□□ 0.2
CASC4-209ENST00000559222 CDH11P55287 796 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 CCNIQ14094 377 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 C10orf128Q5T292 105 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 SMARCD3Q6STE5 483 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 KLHL17Q6TDP4 642 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 TMEM108Q6UXF1 575 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 PTCHD4Q6ZW05 846 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 HS3ST5Q8IZT8 346 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 AQP11Q8NBQ7 271 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 GNPDA2Q8TDQ7 276 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 IGFBPL1Q8WX77 278 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 NABP1Q96AH0 204 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 MS4A3Q96HJ5 214 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 ZNF75AQ96N20 296 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 ZNF570Q96NI8 536 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 SLC38A2Q96QD8 506 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 PLA2G12AQ9BZM1 189 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 REEP1Q9H902 201 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 OBP2BQ9NPH6 170 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 NRIP3Q9NQ35 241 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 IER3IP1Q9Y5U9 82 aa16.28■□□□□ 0.2
CASC4-209ENST00000559222 E7EQL1 145 aa16.27■□□□□ 0.2
CASC4-209ENST00000559222 SOCS2O14508 198 aa16.27■□□□□ 0.2
CASC4-209ENST00000559222 ARHGEF9O43307 516 aa16.27■□□□□ 0.2
CASC4-209ENST00000559222 CST1P01037 141 aa16.27■□□□□ 0.2
CASC4-209ENST00000559222 IGLV1-44P01699 117 aa16.27■□□□□ 0.2
CASC4-209ENST00000559222 CD79AP11912 226 aa16.27■□□□□ 0.2
CASC4-209ENST00000559222 PTAFRP25105 342 aa16.27■□□□□ 0.2
CASC4-209ENST00000559222 CALCRP30988 508 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms