RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 PYCARD-AS1I3L0S3 204 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 I3L1I5 382 aaPredicted RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 TOX4O94842 621 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 HTR3BO95264 441 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CTSAP10619 480 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 HOXB2P14652 356 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 NME2P22392 152 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 Q6ZTK2 550 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 FAM185AQ8N0U4 392 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 MARC2Q969Z3 335 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CDC6Q99741 560 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 PRRG4Q9BZD6 226 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 GAREM1Q9H706 876 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SLC23A2Q9UGH3 650 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 UBE2J1Q9Y385 318 aaPredicted RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 ZNF175Q9Y473 711 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 ZNF236Q9UL36 1845 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 A0A0G2JMZ2 1700 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 LRRC37A2A6NM11 1700 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SLC16A7O60669 478 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 HEXBP07686 556 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 IFNGR1P15260 489 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 UBE2IP63279 158 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 RHOUQ7L0Q8 258 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 OR1M1Q8NGA1 313 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CA5BP1Q8WTZ4 195 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SMIM4Q8WVI0 70 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 ZC3HAV1LQ96H79 300 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 RADILQ96JH8 1075 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 GPA33Q99795 319 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 PRRT1Q99946 306 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SLC19A3Q9BZV2 496 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 B3GALT1Q9Y5Z6 326 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 MYO16Q9Y6X6 1858 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 IGLV3-16A0A075B6K0 115 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 IFITM5A6NNB3 132 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 RNF212BA8MTL3 300 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SYT7O43581 403 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CTNSO60931 367 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 MPIG6BO95866 241 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CBX7O95931 251 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 PMP2P02689 132 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CD63P08962 238 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 NR2C1P13056 603 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 RPS27P42677 84 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 SOX9P48436 509 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 MAT1AQ00266 395 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 KCNAB1Q14722 419 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SMAD2Q15796 467 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 H3F3CQ6NXT2 135 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 GLDNQ6ZMI3 551 aaPredicted RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 DBX2Q6ZNG2 339 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 ADIPOR2Q86V24 386 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SMIM19Q96E16 107 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CNRIP1Q96F85 164 aaPredicted RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 SLC41A2Q96JW4 573 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 TGM7Q96PF1 710 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 C20orf141Q9NUB4 165 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CGGBP1Q9UFW8 167 aaPredicted RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 KCND3Q9UK17 655 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 EXOGQ9Y2C4 368 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 OR51B4Q9Y5P0 310 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 PHOX2AO14813 284 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 F10P00742 488 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 HOXB5P09067 269 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CPT2P23786 658 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 RAB7AP51149 207 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 PLCXD2Q0VAA5 305 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CDK5R1Q15078 307 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 EBPQ15125 230 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 MPEG1Q2M385 716 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 LCN10Q6JVE6 187 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 FAM3DQ96BQ1 224 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 WDR92Q96MX6 357 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 GPR137Q96N19 417 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 APOOQ9BUR5 198 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 OR52A5Q9H2C5 316 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 EPHX3Q9H6B9 360 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 MBNL1Q9NR56 388 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 KLRF1Q9NZS2 232 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 PRODH2Q9UF12 536 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 FBXL4Q9UKA2 621 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 PRELID3BQ9Y3B1 194 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 NEUROG3Q9Y4Z2 214 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 ZNF726A6NNF4 738 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 HTR2CP28335 458 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 NR0B1P51843 470 aaKnown RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 HLXQ14774 488 aaPredicted RBP6.53□□□□□ -1.36
USP3-210ENST00000559192 TMPRSS7Q7RTY8 843 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 OR4D9Q8NGE8 314 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 OR9A4Q8NGU2 314 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 ADIPOR1Q96A54 375 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 BORCS8Q96FH0 119 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 CAPNS2Q96L46 248 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 TSSK2Q96PF2 358 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SDF2Q99470 211 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 ARHGDIGQ99819 225 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 WFDC6Q9BQY6 131 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 BCL2L10Q9HD36 194 aa6.53□□□□□ -1.36
USP3-210ENST00000559192 SPHK1Q9NYA1 384 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms