RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 LIX1LQ8IVB5 337 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 C20orf196Q8IYI0 205 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 DEPDC4Q8N2C3 294 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF808Q8N4W9 903 aaPredicted RBP5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 DHRSXQ8N5I4 330 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 ZNF610Q8N9Z0 462 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC37A3Q8NCC5 494 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 HDAC2Q92769 488 aaKnown RBP5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 TMEM54Q969K7 222 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 LRR1Q96L50 414 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 SNX18Q96RF0 628 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 MBOAT4Q96T53 435 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 KCNK17Q96T54 332 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 NMNAT3Q96T66 252 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 APOL4Q9BPW4 351 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 ADI1Q9BV57 179 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 RBM24Q9BX46 236 aaKnown RBP5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 LINC00470Q9BZP3 86 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 GRIP2Q9C0E4 1043 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 SYT4Q9H2B2 425 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 RERGLQ9H628 205 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 CRLF2Q9HC73 371 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 RPRD1BQ9NQG5 326 aaKnown RBP5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 PLSCR4Q9NRQ2 329 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC7A10Q9NS82 523 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 FAM118AQ9NWS6 357 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 TVP23BQ9NYZ1 205 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 GLTPQ9NZD2 209 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 VSX1Q9NZR4 365 aaPredicted RBP5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 MALT1Q9UDY8 824 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 PRSS50Q9UI38 385 aa5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 FOXD3Q9UJU5 478 aaPredicted RBP5.83□□□□□ -1.48
CHRNA3-204ENST00000559002 KIAA1549Q9HCM3 1950 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 LOC100130705A0A1B0GUX0 176 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 A0A1W2PPL8 197 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CIB4A0PJX0 185 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC22A23A1A5C7 686 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 PRR23D1E9PI22 279 aaPredicted RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 M0R129 80 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 DLGAP1O14490 977 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC16A6O15403 523 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 DHHO43323 396 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC16A7O60669 478 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 KHDRBS3O75525 346 aaKnown RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CLDN14O95500 239 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 SLC2A10O95528 541 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 QDPRP09417 244 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 PRR23D2P0DMB1 279 aaPredicted RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 AGAP20933 346 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 IL32P24001 234 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 EDNRAP25101 427 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 MPGP29372 298 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 HOXC12P31275 282 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 NTF4P34130 210 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CAPGP40121 348 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CDKN2AP42771 156 aaKnown RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CENPAP49450 140 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 PCYT1AP49585 367 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 SH3BGRP55822 239 aaPredicted RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 RPS7P62081 194 aaKnown RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 TGFBR3Q03167 851 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 FMODQ06828 376 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 LGALS3BPQ08380 585 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 KEAP1Q14145 624 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CRMP1Q14194 572 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 P2RY6Q15077 328 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CEACAM16Q2WEN9 425 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 C9orf135Q5VTT2 229 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 C12orf73Q69YU5 71 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 XKRXQ6PP77 449 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CXXC5Q7LFL8 322 aaKnown RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 WDFY1Q8IWB7 410 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 TCEANCQ8N8B7 351 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 CYB561A3Q8NBI2 242 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 RELL2Q8NC24 303 aaPredicted RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 SETD9Q8NE22 299 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 PROKR2Q8NFJ6 384 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 OR8J1Q8NGP2 316 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 OR9Q1Q8NGQ5 310 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 OR2T4Q8NH00 348 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 LILRB4Q8NHJ6 448 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 NSMAFQ92636 917 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 MCHR2Q969V1 340 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 HRASLS5Q96KN8 279 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 IL4I1Q96RQ9 567 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 PITX2Q99697 317 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 MRPL13Q9BYD1 178 aaKnown RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 FN3KQ9H479 309 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 GPR35Q9HC97 309 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 KCNJ16Q9NPI9 418 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 TAS2R16Q9NYV7 291 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 H2AFY2Q9P0M6 372 aaPredicted RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 NDRG4Q9ULP0 352 aaKnown RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 GPR52Q9Y2T5 361 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 FKBP7Q9Y680 259 aa5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 SPTAN1Q13813 2472 aaKnown RBP5.82□□□□□ -1.48
CHRNA3-204ENST00000559002 DOCK7Q96N67 2140 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 ANKHD1Q8IWZ3 2542 aaKnown RBP5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 RELNP78509 3460 aa5.81□□□□□ -1.48
CHRNA3-204ENST00000559002 DIDO1Q9BTC0 2240 aaKnown RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms