RNA–Protein interactions for RNA: ENST00000558373.5

CTDSPL2-202, Transcript of CTD small phosphatase like 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSPL2, Length 4,255 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-202ENST00000558373 PAQR6Q6TCH4 344 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PRSS48Q7RTY5 328 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNF571Q7Z3V5 609 aaPredicted RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CMC1Q7Z7K0 106 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 LINC00523Q86TU6 105 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 IQCKQ8N0W5 287 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 TTC29Q8NA56 475 aaPredicted RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 SPERTQ8NA61 448 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 AQP11Q8NBQ7 271 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNRF1Q8ND25 227 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 OR4F6Q8NGB9 312 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CT45A3Q8NHU0 189 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ADAMTS16Q8TE57 1224 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 RNF139Q8WU17 664 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ELMO1Q92556 727 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PRRC1Q96M27 445 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 FAM218AQ96MZ4 157 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 RNF157Q96PX1 679 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PPA2Q9H2U2 334 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 Q9H3A6 140 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 SLC25A22Q9H936 323 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 NANOGQ9H9S0 305 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 FANCFQ9NPI8 374 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZC4H2Q9NQZ6 224 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 THAP10Q9P2Z0 257 aaPredicted RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CHTOPQ9Y3Y2 248 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ASB3Q9Y575 518 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CDH10Q9Y6N8 788 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 V9GY05 133 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CEP350Q5VT06 3117 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 KIF21BO75037 1637 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CLASP1Q7Z460 1538 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 DICER1Q9UPY3 1922 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PLEKHG1Q9ULL1 1385 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 USP42Q9H9J4 1324 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 KCNE1BA0A087WTH5 132 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 HAT1O14929 419 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 KLHL41O60662 606 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 DIRAS1O95057 198 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 STAG3L3P0CL85 134 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 LAMP1P11279 417 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 KITLGP21583 273 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 COX7A1P24310 79 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 STOMP27105 288 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 RORAP35398 523 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ARR3P36575 388 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 NUP62P37198 522 aaPredicted RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 GPX6P59796 221 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 RPL8P62917 257 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 C2orf54Q08AI8 447 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PEX6Q13608 980 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 SLC10A1Q14973 349 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZBED5Q49AG3 693 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 GGTA1PQ4G0N0 100 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CAVIN4Q5BKX8 364 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PPM1LQ5SGD2 360 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CCNJQ5T5M9 372 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ZNF772Q68DY9 489 aaPredicted RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 THOC7Q6I9Y2 204 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 OR52E8Q6IFG1 317 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 Q6ZTC4 211 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 P2RY8Q86VZ1 359 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 NR2C2APQ86WQ0 139 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CCDC71Q8IV32 467 aaPredicted RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PSTKQ8IV42 348 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ERI1Q8IV48 349 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 KLHDC8BQ8IXV7 354 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 TRIML2Q8N7C3 387 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 SUMF1Q8NBK3 374 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 OR5T3Q8NGG3 340 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ACOT11Q8WXI4 607 aaPredicted RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ISG20Q96AZ6 181 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PPWD1Q96BP3 646 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 PELI1Q96FA3 418 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 RBKSQ9H477 322 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 RHOJQ9H4E5 214 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 METTL8Q9H825 291 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 MRM3Q9HC36 420 aaKnown RBP1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 VCX3AQ9NNX9 186 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 VNN3Q9NY84 501 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 CACNG5Q9UF02 275 aa1.06□□□□□ -2.24
CTDSPL2-202ENST00000558373 ERICH3Q5RHP9 1530 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 KIF20BQ96Q89 1820 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 PTPRFP10586 1907 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 WDR87Q6ZQQ6 2873 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 SRRM4A7MD48 611 aaKnown RBP1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 A8MUA0 341 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 H3BMQ9 156 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 BCL2L11O43521 198 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 PRKYO43930 277 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 FAM189A1O60320 539 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 EIF3GO75821 320 aaKnown RBP eCLIP1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 HPRT1P00492 218 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 ATP1B2P14415 290 aaPredicted RBP1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 IGLL1P15814 213 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 GTF2E2P29084 291 aaKnown RBP1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 SPAM1P38567 509 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 HTR2BP41595 481 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 PRKXP51817 358 aa1.05□□□□□ -2.24
CTDSPL2-202ENST00000558373 NSDHLQ15738 373 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms