RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 LRFN4Q6PJG9 635 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 PIWIL3Q7Z3Z3 882 aaKnown RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 ARPINQ7Z6K5 226 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 VTCN1Q7Z7D3 282 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 OR4K5Q8NGD3 323 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 RP9Q8TA86 221 aaKnown RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 ASB10Q8WXI3 467 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 PRRC1Q96M27 445 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 ZNF75AQ96N20 296 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 DOK1Q99704 481 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 SYT3Q9BQG1 590 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 MRPL37Q9BZE1 423 aaKnown RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 POLR2J2Q9GZM3 115 aaKnown RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 POLR2J3Q9H1A7 115 aaKnown RBP10.29□□□□□ -0.76
HERC1-202ENST00000558324 OR51B6Q9H340 312 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 RNF121Q9H920 327 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 MED4Q9NPJ6 270 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 INIPQ9NRY2 104 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 CMAHPQ9Y471 501 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 SPEF1Q9Y4P9 236 aa10.29□□□□□ -0.76
HERC1-202ENST00000558324 IGHV4-61A0A0C4DH41 118 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 LOC390937A0A1W2PQ73 354 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 VWC2LB2RUY7 222 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 J3KTA2 159 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 NME4O00746 187 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 GSTA4O15217 222 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 FARS2O95363 451 aaKnown RBP10.28□□□□□ -0.76
HERC1-202ENST00000558324 ADRA2AP08913 450 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 IGHV4-31P0DP07 118 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 IFI30P13284 250 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 CCL2P13500 99 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 ZNF35P13682 527 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 DAOP14920 347 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 FUT4P22083 530 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 LSP1P33241 339 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 NUDT2P50583 147 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 DAP3P51398 398 aaKnown RBP10.28□□□□□ -0.76
HERC1-202ENST00000558324 SELENOWP63302 87 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 ST3GAL3Q11203 375 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 LAPTM4AQ15012 233 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 CHRFAM7AQ494W8 412 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 ZNF584Q8IVC4 421 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 SLC15A3Q8IY34 581 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 LZICQ8WZA0 190 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 MCHR2Q969V1 340 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 MRPL24Q96A35 216 aaKnown RBP10.28□□□□□ -0.76
HERC1-202ENST00000558324 KCNK17Q96T54 332 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 MDFIQ99750 246 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 BPESC1Q9GZL8 116 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 MYOZ1Q9NP98 299 aaPredicted RBP10.28□□□□□ -0.76
HERC1-202ENST00000558324 A4GNTQ9UNA3 340 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 SNX13Q9Y5W8 968 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 ALPK2Q86TB3 2170 aa10.28□□□□□ -0.76
HERC1-202ENST00000558324 ABCA2Q9BZC7 2435 aa10.27□□□□□ -0.76
HERC1-202ENST00000558324 M0R233 179 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 NDUFS8O00217 210 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 CXCR6O00574 342 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 CCDC22O60826 627 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 ENTPD5O75356 428 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 TRMUO75648 421 aaKnown RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 SLC2A10O95528 541 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 IFNW1P05000 195 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 SERPINA5P05154 406 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 IGFBP1P08833 259 aaPredicted RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 FAM157BP0CG42 384 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 THRBP10828 461 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 APEHP13798 732 aaKnown RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 ACADSP16219 412 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 TCN1P20061 433 aaPredicted RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 IFNA8P32881 189 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 ALDH3B1P43353 468 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 ZNF84P51523 738 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 FMODQ06828 376 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 CD47Q08722 323 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 MAD2L1BPQ15013 274 aaPredicted RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 ALG10Q5BKT4 473 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 CYB5R2Q6BCY4 276 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 TMEM53Q6P2H8 277 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 SLC16A14Q7RTX9 510 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 HDDC2Q7Z4H3 204 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 IGFN1Q86VF2 1251 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 LRP11Q86VZ4 500 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 TREML1Q86YW5 311 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 HIPK1Q86Z02 1210 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 LRRC18Q8N456 261 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 PAQR4Q8N4S7 273 aaPredicted RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 SLC30A7Q8NEW0 376 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 HDAC2Q92769 488 aaKnown RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 BPIFA2Q96DR5 249 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 FNDC11Q9BVV2 318 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 FAM107BQ9H098 131 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 DENND2DQ9H6A0 471 aaPredicted RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 CHODLQ9H9P2 273 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 MYEF2Q9P2K5 600 aaKnown RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 SLC7A8Q9UHI5 535 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 DUSP13Q9UII6 198 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 FBXO9Q9UK97 447 aaPredicted RBP10.27□□□□□ -0.77
HERC1-202ENST00000558324 FBXL3Q9UKT7 428 aa10.27□□□□□ -0.77
HERC1-202ENST00000558324 DNHD1Q96M86 4753 aa10.26□□□□□ -0.77
HERC1-202ENST00000558324 TRAV27A0A087WT01 109 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms