RNA–Protein interactions for RNA: ENST00000558264.5

TPM1-210, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 2,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-210ENST00000558264 FBXL2Q9UKC9 423 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 PAIP2BQ9ULR5 123 aaKnown RBP9.5□□□□□ -0.89
TPM1-210ENST00000558264 COA3Q9Y2R0 106 aaPredicted RBP9.5□□□□□ -0.89
TPM1-210ENST00000558264 FREM3P0C091 2139 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 GPR179Q6PRD1 2367 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 TRAV8-7A0A075B6U6 113 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 IGKV1D-43A0A0B4J1Z2 117 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 C19orf67A6NJJ6 358 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 G3V3Y1 287 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 EFNA2O43921 213 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 SLC43A1O75387 559 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 GATBO75879 557 aaKnown RBP9.5□□□□□ -0.89
TPM1-210ENST00000558264 DXOO77932 396 aaKnown RBP9.5□□□□□ -0.89
TPM1-210ENST00000558264 MT-ATP6P00846 226 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 TACSTD2P09758 323 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 FBXO45P0C2W1 286 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 RCVRNP35243 200 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 CLDN6P56747 220 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 C17orf67Q0P5P2 114 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 SQSTM1Q13501 440 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 EFR3AQ14156 821 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 MZT2BQ6NZ67 158 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 FCRLAQ7L513 359 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 WDR5BQ86VZ2 330 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 LINC00346Q8IVM7 164 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 SCAIQ8N9R8 606 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 OR2G2Q8NGZ5 317 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 ST6GAL2Q96JF0 529 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 C5orf34Q96MH7 638 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 UBL7Q96S82 380 aaPredicted RBP9.5□□□□□ -0.89
TPM1-210ENST00000558264 KCNJ15Q99712 375 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 NDEL1Q9GZM8 345 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 ABCG5Q9H222 651 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 TXNIPQ9H3M7 391 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 LIN7BQ9HAP6 207 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 ELOVL3Q9HB03 270 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 BOLA1Q9Y3E2 137 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 ALG5Q9Y673 324 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 CPAMD8Q8IZJ3 1885 aa9.5□□□□□ -0.89
TPM1-210ENST00000558264 TRAV6A0A075B6T7 132 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 A0A1W2PPC1 479 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 SLC22A23A1A5C7 686 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 HTR3EA5X5Y0 456 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 ANKUB1A6NFN9 424 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 VSTM2BA6NLU5 285 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 D6RAR5 112 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 FTCDNL1E5RQL4 147 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 PNPP00491 289 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 IMPDH2P12268 514 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 ADRA2CP18825 462 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 CAPZA2P47755 286 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 RPS15P62841 145 aaKnown RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 PUDPQ08623 228 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 PLA2G7Q13093 441 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 WDR38Q5JTN6 314 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 CORO6Q6QEF8 472 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 UNQ9370/PRO34162Q6UXP9 181 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 CMTM4Q8IZR5 234 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TEX19Q8NA77 164 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 OTOSQ8NHW6 89 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TMEM234Q8WY98 164 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 NAT6Q93015 286 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 MR1Q95460 341 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 KCNK15Q9H427 330 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TCF7L1Q9HCS4 588 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 NCOR1O75376 2440 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 IGLV1-36A0A0B4J1U3 117 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 A0A1W2PNR3 127 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TRABD2BA6NFA1 517 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 MS4A18H0YCH9 400 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 GPRIN2O60269 458 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 FAM157BP0CG42 384 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 KLK2P20151 261 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 KIR3DL2P43630 455 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 EIF1AXP47813 144 aaKnown RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 TLE3Q04726 772 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 MFGE8Q08431 387 aaPredicted RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 SF3A2Q15428 464 aaKnown RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 MS4A18Q3C1V0 323 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 YIF1BQ5BJH7 314 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 NUBPLQ8TB37 319 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TMEM106AQ96A25 262 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 DEFB126Q9BYW3 111 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 FBXL3Q9UKT7 428 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 RPH3AQ9Y2J0 694 aaPredicted RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 N6AMT1Q9Y5N5 214 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 SDK2Q58EX2 2172 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TECTAO75443 2155 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 OR4C45A6NMZ5 311 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 IFITM5A6NNB3 132 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 EIF1AYO14602 144 aaKnown RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 ZFAND5O76080 213 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 SFTPDP35247 375 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 RIN1Q13671 783 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 EIF2B1Q14232 305 aaKnown RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 Q499Y3 187 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 STAC2Q6ZMT1 411 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TMPRSS12Q86WS5 348 aa9.49□□□□□ -0.89
TPM1-210ENST00000558264 TSEN15Q8WW01 171 aaKnown RBP9.49□□□□□ -0.89
TPM1-210ENST00000558264 RASL10BQ96S79 203 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms