RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 ZNF440Q8IYI8 595 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SPICQ8N5J4 248 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SLC35G3Q8N808 338 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF738Q8NE65 137 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 OR5M1Q8NGP8 315 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 GOT1L1Q8NHS2 421 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 TMEM239Q8WW34 195 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CPNE4Q96A23 557 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 WWTR1Q9GZV5 400 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CA14Q9ULX7 337 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 F6UZH7 168 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 WNT10BO00744 389 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SMAD6O43541 496 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ACTR1BP42025 376 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 INCA1Q0VD86 236 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SLC36A2Q495M3 483 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 GLDNQ6ZMI3 551 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 TMEFF1Q8IYR6 380 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 OR6K3Q8NGY3 331 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 GPR137Q96N19 417 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PLEKHA1Q9HB21 404 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 HHLA2Q9UM44 414 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 FAM24AA6NFZ4 105 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 UGDHO60701 494 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CLRN1P58418 232 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 B3GNTL1Q67FW5 361 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ARL6IP6Q8N6S5 226 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 OR11H7Q8NGC8 314 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PIGCQ92535 297 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 RBM38Q9H0Z9 239 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 NEUROD4Q9HD90 331 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PPP1R3CQ9UQK1 317 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SPTBN2O15020 2390 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 GCM2O75603 506 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 DND1Q8IYX4 353 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 RBMXL1Q96E39 390 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SIDT1Q9NXL6 827 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ZFYVE9O95405 1425 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 RAG2P55895 527 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 TCTN3Q6NUS6 607 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF880Q6PDB4 577 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 OPN5Q6U736 354 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SH3RF2Q8TEC5 729 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 NUS1Q96E22 293 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 PITPNC1Q9UKF7 332 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CLEC4EQ9ULY5 219 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 EXOGQ9Y2C4 368 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF835Q9Y2P0 537 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 STRAPQ9Y3F4 350 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 IFITM5A6NNB3 132 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ADH1BP00325 375 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 OPRD1P41143 372 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 MASP1P48740 699 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 RAB7AP51149 207 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 GLYR1Q49A26 553 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 KIAA0319Q5VV43 1072 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 SLCO4C1Q6ZQN7 724 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 TRMT2BQ96GJ1 504 aaKnown RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 REEP6Q96HR9 211 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CPPED1Q9BRF8 314 aaPredicted RBP3.4□□□□□ -1.86
ATXN3-248ENST00000558190 CHST8Q9H2A9 424 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 Q9N2J8 555 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 NESP48681 1621 aa3.4□□□□□ -1.86
ATXN3-248ENST00000558190 ZNF587BE7ETH6 402 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 IL12BP29460 328 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 NKX3-1Q99801 234 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-248ENST00000558190 ADGRL4Q9HBW9 690 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 NTNG1Q9Y2I2 539 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 CCSO14618 274 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 GABRR1P24046 479 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 SCAPQ12770 1279 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 ELOCQ15369 112 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 PLXDC2Q6UX71 529 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 NHLRC1Q6VVB1 395 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF485Q8NCK3 441 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 PPTC7Q8NI37 304 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 TMEM121BQ9BXQ6 578 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-248ENST00000558190 ZFP92A6NM28 416 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 CCL16O15467 120 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 LANCL1O43813 399 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 LFNGQ8NES3 379 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 OR51Q1Q8NH59 317 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 ZNF586Q9NXT0 402 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 VAX2Q9UIW0 290 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 STC2O76061 302 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 MMP9P14780 707 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 ABCD3P28288 659 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 RBMS1P29558 406 aaKnown RBP3.4□□□□□ -1.87
ATXN3-248ENST00000558190 TPPP2P59282 170 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 CLEC1AQ8NC01 280 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 TBC1D20Q96BZ9 403 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 SEH1LQ96EE3 360 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 SMG9Q9H0W8 520 aaKnown RBP3.4□□□□□ -1.87
ATXN3-248ENST00000558190 GSX1Q9H4S2 264 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-248ENST00000558190 PRODH2Q9UF12 536 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 RPLP2P05387 115 aaKnown RBP3.4□□□□□ -1.87
ATXN3-248ENST00000558190 MESTQ5EB52 335 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 ASPGQ86U10 573 aa3.4□□□□□ -1.87
ATXN3-248ENST00000558190 NAA11Q9BSU3 229 aaPredicted RBP3.4□□□□□ -1.87
ATXN3-248ENST00000558190 SLCO1B1Q9Y6L6 691 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms