RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 SEC23BQ15437 767 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SGCAQ16586 387 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 DEFB113Q30KQ7 82 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SLC36A2Q495M3 483 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 ZNF672Q499Z4 452 aaPredicted RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 C1orf146Q5VVC0 180 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 OR2T5Q6IEZ7 315 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 TMEM53Q6P2H8 277 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 VHLLQ6RSH7 139 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SMARCD3Q6STE5 483 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 TMPRSS11FQ6ZWK6 438 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SLC16A14Q7RTX9 510 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 TSEN54Q7Z6J9 526 aaKnown RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 MDP1Q86V88 176 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 AQP12AQ8IXF9 295 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 CCDC36Q8IYA8 594 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 FBXL14Q8N1E6 418 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 LRRC18Q8N456 261 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 LINC00471Q8N535 108 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 OR2T29Q8NH02 315 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 FNDC8Q8TC99 324 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 MAGEE2Q8TD90 523 aaPredicted RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 HDAC2Q92769 488 aaKnown RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 NEUROG1Q92886 237 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 MCHR2Q969V1 340 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 SLC7A6OSQ96CW6 309 aaPredicted RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 ZNF837Q96EG3 531 aaPredicted RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 PERPQ96FX8 193 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 TSPAN32Q96QS1 320 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 IFT27Q9BW83 186 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 CXorf56Q9H5V9 222 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 CCNB1IP1Q9NPC3 277 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 CISD1Q9NZ45 108 aaKnown RBP7.85□□□□□ -1.15
SPG11-207ENST00000558138 MOKQ9UQ07 419 aa7.85□□□□□ -1.15
SPG11-207ENST00000558138 IGHV1-18A0A0C4DH31 117 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 TEX13CA0A0J9YWL9 993 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 VSTM5A8MXK1 200 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 CENPBD1B2RD01 187 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 ATP6V1G2-DDX39BF2Z307 99 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 GSC2O15499 205 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 PPP1R3DO95685 299 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 IGHMP01871 453 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 CD14P08571 375 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 SLC6A6P31641 620 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 ARR3P36575 388 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 OMPP47874 163 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 ARHGDIAP52565 204 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 RPS4XP62701 263 aaKnown RBP7.84□□□□□ -1.15
SPG11-207ENST00000558138 CBX1P83916 185 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 GALK2Q01415 458 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 HSF2Q03933 536 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 PLP2Q04941 152 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 RUNX1T1Q06455 604 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 FMODQ06828 376 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 KRR1Q13601 381 aaKnown RBP7.84□□□□□ -1.15
SPG11-207ENST00000558138 ARMC4Q5T2S8 1044 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 C1QTNF12Q5T7M4 302 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 GPR139Q6DWJ6 353 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 PIWIL3Q7Z3Z3 882 aaKnown RBP7.84□□□□□ -1.15
SPG11-207ENST00000558138 WDFY1Q8IWB7 410 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 SLC22A24Q8N4F4 322 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 AQP11Q8NBQ7 271 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 OR9Q2Q8NGE9 314 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 SMAP2Q8WU79 429 aaPredicted RBP7.84□□□□□ -1.15
SPG11-207ENST00000558138 HTRA1Q92743 480 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 RASD2Q96D21 266 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 DHRS1Q96LJ7 313 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 Q96M85 177 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 ERMAPQ96PL5 475 aaPredicted RBP7.84□□□□□ -1.15
SPG11-207ENST00000558138 SH3GL3Q99963 347 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 ALG12Q9BV10 488 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 CHID1Q9BWS9 393 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 CADM1Q9BY67 442 aaKnown RBP7.84□□□□□ -1.15
SPG11-207ENST00000558138 TBC1D23Q9NUY8 699 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 TMEM38BQ9NVV0 291 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 BEX4Q9NWD9 120 aaPredicted RBP7.84□□□□□ -1.15
SPG11-207ENST00000558138 KIF17Q9P2E2 1029 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 POMPQ9Y244 141 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 POLR1DQ9Y2S0 133 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 ADAM18Q9Y3Q7 739 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 SPEF1Q9Y4P9 236 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 IER3IP1Q9Y5U9 82 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 LYVE1Q9Y5Y7 322 aa7.84□□□□□ -1.15
SPG11-207ENST00000558138 ANKRD17O75179 2603 aaKnown RBP7.83□□□□□ -1.16
SPG11-207ENST00000558138 DCHS2Q6V1P9 2916 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 IQCMA0A1B0GVH7 501 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 NPIPB13A6NJU9 1138 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 SHISA9B4DS77 424 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 NPIPB4C9JG80 1138 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 EBAG9O00559 213 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 ACOT8O14734 319 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 RENP00797 406 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 CELA3BP08861 270 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 CECR9P0C854 216 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 CBR1P16152 277 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 HOXB6P17509 224 aaKnown RBP7.83□□□□□ -1.16
SPG11-207ENST00000558138 CD53P19397 219 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 NPR2P20594 1047 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 FPR3P25089 353 aa7.83□□□□□ -1.16
SPG11-207ENST00000558138 LOXP28300 417 aaPredicted RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms